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berkeley_reactor_200306_biofilm_scaffold_6049_8

Organism: 2019_SCN_bioreactor_200211_biofilm_Singulisphaera_acidiphila_69_8

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: comp(11446..12159)

Top 3 Functional Annotations

Value Algorithm Source
Antifreeze glycoprotein n=1 Tax=Arctogadus glacialis RepID=H2KMI7_ARCGL similarity UNIREF
DB: UNIREF100
  • Identity: 33.2
  • Coverage: 211.0
  • Bit_score: 73
  • Evalue 1.60e-10
Antifreeze glycoprotein {ECO:0000313|EMBL:AAQ09569.1}; TaxID=185735 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Zeiogadaria; Gadariae; Gadiformes; Gadoidei; Gadidae; Arctogadus.;" source="Arctogadus glacialis (Arctic cod).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 33.2
  • Coverage: 211.0
  • Bit_score: 73
  • Evalue 2.30e-10
Major facilitator superfamily MFS_1 similarity KEGG
DB: KEGG
  • Identity: 31.9
  • Coverage: 188.0
  • Bit_score: 57
  • Evalue 3.40e-06

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Taxonomy

Arctogadus glacialis → Arctogadus → Gadiformes → Neopterygii → Chordata → Metazoa

Sequences

DNA sequence
Length: 714
ATGACCAGCTACTTGCGGACCCCGCGCGCCACGTGCTGGGGGATTTCCATCGCCACGCTCCTGGCGGCGAGCCCCGCCTGGGCGCACAAGCCTGACCTGAAGGTCAGGATCGTTCAACGCGGCGGCGCCCCTATCGCCGCCCAGGTTACGACCGGGGCGGCGCCGCTCGTCGTCGTCGGTGGCGTGGCCGCGGCCCCGACCACCTACGCGGCCCCGGTCACCTATGCAGCCCCCGTGACCTACGCAGCGCCGGCCACCTACGCAGCGCCGGTGACTTTGAGCGCCGCGCCTGCCACGGCGAGCGCCGCCCAGTACGTCCTGGTCCCCGCTTCAGCCGCGCCGGCCGCGGGGGGCGGTTCGGCCGCACCGAATGCGGGCTCGGGAAATAAGGTGAAGATCACTAAGGGGTCGGCGGAGATCGAGGTCGACCGCTCGGTGCTGGAGTCGCTTCTGAAGGAAGCGGGCGATTCCCAGGCCCCGGCGAAGGCCCCCGGGGGGAACAACGGCCAGGCCGCGGCCGTGACCGGCACGAACTATGTGATCCTTTCGGCCGCCCCCCAACAGCAGGTGCAGGCCGCCCCGGCCCAGACGGTCCTGCAAGCCGCCCCGGCCCAACAGATCGTGATCCAGGCGGCTCCGGCCGCCGCCCAGGTCCAGGCGACCGGGACGACGGTGATCGTGGTCGGCAGCCGAAAGTGGTGCCTGTTCCCGTAA
PROTEIN sequence
Length: 238
MTSYLRTPRATCWGISIATLLAASPAWAHKPDLKVRIVQRGGAPIAAQVTTGAAPLVVVGGVAAAPTTYAAPVTYAAPVTYAAPATYAAPVTLSAAPATASAAQYVLVPASAAPAAGGGSAAPNAGSGNKVKITKGSAEIEVDRSVLESLLKEAGDSQAPAKAPGGNNGQAAAVTGTNYVILSAAPQQQVQAAPAQTVLQAAPAQQIVIQAAPAAAQVQATGTTVIVVGSRKWCLFP*