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berkeley_reactor_200306_biofilm_scaffold_6049_17

Organism: 2019_SCN_bioreactor_200211_biofilm_Singulisphaera_acidiphila_69_8

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: 29301..31079

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Schlesneria paludicola RepID=UPI00029A2526 similarity UNIREF
DB: UNIREF100
  • Identity: 59.0
  • Coverage: 546.0
  • Bit_score: 625
  • Evalue 3.60e-176
outer membrane protein similarity KEGG
DB: KEGG
  • Identity: 53.6
  • Coverage: 605.0
  • Bit_score: 591
  • Evalue 1.70e-166
Outer membrane protein {ECO:0000313|EMBL:AGA30958.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.6
  • Coverage: 605.0
  • Bit_score: 591
  • Evalue 8.20e-166

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Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1779
ATGAACCAGTTCGTGAGGTTGTCGAACACACGGCACCAGACGCAAGCCGTGGCGACCGCGATCGCCTGTGGCTTTCTTCTGGTCTTGCCGTCCTGCGGAATCCCCGATCTCCGTAAGCCGGTTCCGGTAGCGCCCCTACCGAATACCTTCAACGGGTCGACCAGCCCGGAGAGTTCCTCCCGGGTCTGCGCCGAGGAATTTTTCAACGACCCGAAGCTCCTCAGCCTGATCAACCAATCACTAACCGGCAACCTGGAGCAAAAGATCCTCGCCCAGGACGCTCAGATCGCCGCCAACGAGATCCTGGCGCGGCGGGGGACTTATCTTCCCTTCATAAGTTTCGGGGGCGGCGCCGGCCTCAGCAAAATCAGCGGCTTCACGGCCGAGGGGGCCAGTATCCGCGACGACCCGTTCCGCCCCGGGCAGTTGTTGCCCAACCCGATTCCGAATTTTATCTTCGGCGCCAACCTCACCTGGCAACTGGACGTCTGGAGGCAGCTACGGAATGCCAGGGACGCGGCGGCGATGCGCTTTCTTAGTACCAACGAGAGGCGCAACTATTTCGTGACCCGCATGGTCGCGGACATCGCCGAGAATTACTACGAGCTGATCATGCTCGACAAGCGGATCGAGATCTTGGATCAGACCATCGCCCTTCAGGAACAGAGCCTAAAGGCCGCCGAGCTTAAGAAGGAAGCGGTTCGCGGCACTGAACTGGATGTCCAGCGGTTCCAGGCCGAGGTCCGCAGGAACCAGAGCGAAAAACTGATCGTGAACCAGCAGATCATCGAGATCGAAAACCGCATCAACTTCCTCGTCGGCCGCTACCCGCAGCGCGTCGAGCGCATGACCGGCGACTTCATCGACGTGAACCTGCCCGCGCTGAGACTCGGGGTGCCCTCGCAACTGCTCCAGTTCCGGCCCGACGTCCGTCAGGCCGAGCGCGATATCGAGGCGACCGGTCTCGACGTGAAGGTCGCCCGGGCCAACTTCTATCCGAAATTCATCATTAACAGCGGCGTCGGCTATCAGGCCTTCAACCCGAAGTATCTACTCATCACTCCGGAAGCGTTGATCTACAACATCGCCGGCGACATCATCGCGCCGCTGGTCAACAAGAAGGCGATCCAGGCGGAATACGTCACGGCGAACTCCAGGCAATTGCAGGCACTCTACAACTACCAGAAGACGATCCTCAACGCCTTCACCGAGGTGATCAACCGCGTCACTAAGGTGGAGAACTACGGCAACAGCATCGAACTCAAGAAGCAGCAGGTGGCGGCGCTCGAACGCTCCGTGAACATCGCCACCCAGCTTTATCAGGCCGCTCGCGCTGACTACGTGGACGTGCTCTTCGCTCAGCGCGACCTCAGGGATGCGAGGGTGGCCCTGGTCGAAACCAAACAGCAACAACTGGCCGCCATCGTAAACACCTATCAAGCCCTCGGCGGCGGCAATCTGTTGCCGGTTTTCGACCCTTATGTGCCGCCACCTTTCGGTGCGATGAAGCATCTCCGACACTCGGCAGCGGGCGTGGCGGCGAAAAAGGTTCCGGGACCAATCCCGCCTCCTCCGCCGCCGCCAATGAGGGCTCCGGAACCGGTTCCCACACCGGCGGAAAGGCATGCGGAACCGGTTCCACCACCACCGCCGTCGGAAAGGGGGCCGTTCCAGCGTCCACCGCTGACGCCGGAAGGTAGGCCGCAACCGATTCCAGCGCCAACGGAAAGCGGAAAGGAGCCCCGAGCCGTTTCCAGCACAGACGGTCCTCCGGGTTGA
PROTEIN sequence
Length: 593
MNQFVRLSNTRHQTQAVATAIACGFLLVLPSCGIPDLRKPVPVAPLPNTFNGSTSPESSSRVCAEEFFNDPKLLSLINQSLTGNLEQKILAQDAQIAANEILARRGTYLPFISFGGGAGLSKISGFTAEGASIRDDPFRPGQLLPNPIPNFIFGANLTWQLDVWRQLRNARDAAAMRFLSTNERRNYFVTRMVADIAENYYELIMLDKRIEILDQTIALQEQSLKAAELKKEAVRGTELDVQRFQAEVRRNQSEKLIVNQQIIEIENRINFLVGRYPQRVERMTGDFIDVNLPALRLGVPSQLLQFRPDVRQAERDIEATGLDVKVARANFYPKFIINSGVGYQAFNPKYLLITPEALIYNIAGDIIAPLVNKKAIQAEYVTANSRQLQALYNYQKTILNAFTEVINRVTKVENYGNSIELKKQQVAALERSVNIATQLYQAARADYVDVLFAQRDLRDARVALVETKQQQLAAIVNTYQALGGGNLLPVFDPYVPPPFGAMKHLRHSAAGVAAKKVPGPIPPPPPPPMRAPEPVPTPAERHAEPVPPPPPSERGPFQRPPLTPEGRPQPIPAPTESGKEPRAVSSTDGPPG*