ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_32105_6

Organism: 2019_SCN_bioreactor_200211_biofilm_Singulisphaera_acidiphila_69_8

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: 6672..7676

Top 3 Functional Annotations

Value Algorithm Source
Flp pilus assembly protein CpaB n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DAL2_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 56.3
  • Coverage: 300.0
  • Bit_score: 315
  • Evalue 4.60e-83
Flp pilus assembly protein CpaB similarity KEGG
DB: KEGG
  • Identity: 56.3
  • Coverage: 300.0
  • Bit_score: 315
  • Evalue 1.30e-83
Flp pilus assembly protein CpaB {ECO:0000313|EMBL:AGA26297.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.3
  • Coverage: 300.0
  • Bit_score: 315
  • Evalue 6.40e-83

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1005
ATGTGGATGTTGATGGTCGCGGTCCTCTGCGGCCTGGGGGCGATGTACGGGACGTCGAAGCTCATCTCAAGGGATAAGGGTCAGCCGGTCGTCGAGATGCAGGACGTCCTCGTCGCGGCCAGGGACCTGAAGCTCGAAGAGGTGATCCGGCCGGACATGGTGAAGGTCGTCCAGATGGCGAAAGCGGCCGTCCCCGCCGGGGCGTTCTCGTCGATCAAGGACGTGGAGGAGCGGTGGGTTCAGCACGCCCTCCTGGAGAACGAGCCGGTCGTCGACCGCAAGCTGGCCCCCCGCGGGAGCCCTCCGGGCCTGATCGCCCGGATCCCCAAGGGGATGCGGGCGTTCGCCATCGAGGTGAACGAACAGACGGGGGTCTCGGGCTTCGTGCTCCCCGACCACCGGGTCGACGTGGTGCAGACGGAAAACGGTCCGAACGGACAGTCGGAAGCGGAATCGGTGCTCCAGGACGTCCTCGTGCTCGCCTCCGGCCAGACGTTCACCCGGCCCGACGACCGTTCGATCCAGTCCCGGACGGTGACCCTGGCGGTGACCCCCGAACAGGTCGACATCCTGGTCGCGGCCAAGTCACGCGGCCCTCTGACGCTGGCCCTGCGGGGCCTGAACGACCACACCCAGGCGCCGTCGAAGAAGAAAGAGCGGGAGAAGGCGAAGGAAAAAGAAAAAGAGGAGAAGGCCGCCGCCTCCAAGGAGGAGCTTGCAGTGGTCAAGGCGCCTGAACCCCCGCCGCCCCCTCCTCCGCCGGCCGCCCCGCCGACCCCGCCCCCGTCGCCCGCCCGGTTCGTGGCGATCTACCGGGGGCTGGACAACATGCGACGACTGAGGATCGACCAGGCGGGCGACGTGACGGATGGCGGCGAGGCGGCCCCGGCGCCTTCGGTTCCCGCAACGCCTGCGGCCCCTTCCTCGCCCGCGGCGGTGATCGCCGCGCCCGCGACCACGGACCCGACGAAGCCGACGGGGACCGGTACTGAGGCGGTGAGATGA
PROTEIN sequence
Length: 335
MWMLMVAVLCGLGAMYGTSKLISRDKGQPVVEMQDVLVAARDLKLEEVIRPDMVKVVQMAKAAVPAGAFSSIKDVEERWVQHALLENEPVVDRKLAPRGSPPGLIARIPKGMRAFAIEVNEQTGVSGFVLPDHRVDVVQTENGPNGQSEAESVLQDVLVLASGQTFTRPDDRSIQSRTVTLAVTPEQVDILVAAKSRGPLTLALRGLNDHTQAPSKKKEREKAKEKEKEEKAAASKEELAVVKAPEPPPPPPPPAAPPTPPPSPARFVAIYRGLDNMRRLRIDQAGDVTDGGEAAPAPSVPATPAAPSSPAAVIAAPATTDPTKPTGTGTEAVR*