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AR_MS4_05142019_scaffold_2713_11

Organism: Alum_Rock_2019_MS4_Methylacidiphilum-related_63_13

near complete RP 46 / 55 MC: 4 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(13782..14354)

Top 3 Functional Annotations

Value Algorithm Source
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=243233 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylococcus.;" source="Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 32.3
  • Coverage: 189.0
  • Bit_score: 88
  • Evalue 9.40e-15
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00036432BE similarity UNIREF
DB: UNIREF100
  • Identity: 66.8
  • Coverage: 187.0
  • Bit_score: 228
  • Evalue 5.40e-57
2'-5' RNA ligase similarity KEGG
DB: KEGG
  • Identity: 32.3
  • Coverage: 189.0
  • Bit_score: 88
  • Evalue 1.90e-15

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Taxonomy

Methylococcus capsulatus → Methylococcus → Methylococcales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 573
ATGAGGGATACGATGCGCTTGTTCTTTGCGCTCTGGCCTCCCGGTGAGGAGCAGATCCTTTTTCGGAACGCCGCACAAGGGCTGGGGCCAAACTTTTCCGCCCGCTGGATCGCACTCGAAAATATCCATCTCACCCTCCTCTTTCTTCCGTCCGTGACAGAGGAGCAGCTCGGCTCCATTTTTTCTCTGGTGGAGCGCTCCTTGCTCCCCGCGATCCTTCTCCGGCTCGACCGGCTGATCTTCCAGCCCTCCGGGAAAGAGGGACTCCTCTGGCTTGCCCCGGCCGAGCGCCTCCCCGTCCTGTCGAACCTTGTCGGGCTGCTGCAAGAGCGACTGACCCACATCGGCCTCTCCACCCAGGAAAGACGCCCCTTCTCTCCGCATATTACTCTGGCCCGGCGCGTAGTCCTCTCCCCGGCGGGAAGCGGAGGCGGGCATCCGTTCGTGCTCCGGAGCTTTGAGGAGCCGATCGACTGGCCGGTTCGAGAGATGGCGCTCGTCTCCTCGGAGACCCTGCCCGAGGGCAGCCGCTATACCCCGCTCGCCTCCTGGGCTCTCCCTGCGTCCGCGTAG
PROTEIN sequence
Length: 191
MRDTMRLFFALWPPGEEQILFRNAAQGLGPNFSARWIALENIHLTLLFLPSVTEEQLGSIFSLVERSLLPAILLRLDRLIFQPSGKEGLLWLAPAERLPVLSNLVGLLQERLTHIGLSTQERRPFSPHITLARRVVLSPAGSGGGHPFVLRSFEEPIDWPVREMALVSSETLPEGSRYTPLASWALPASA*