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AR_MS4_05142019_scaffold_3360_6

Organism: Alum_Rock_2019_MS4_Methylacidiphilum-related_63_13

near complete RP 46 / 55 MC: 4 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(6873..7547)

Top 3 Functional Annotations

Value Algorithm Source
PhoB family transcriptional regulator n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00037195DA similarity UNIREF
DB: UNIREF100
  • Identity: 88.8
  • Coverage: 223.0
  • Bit_score: 399
  • Evalue 1.20e-108
DNA binding copper response regulator {ECO:0000313|EMBL:CCG92723.1}; TaxID=1156937 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum fumariolicum SolV.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.3
  • Coverage: 222.0
  • Bit_score: 332
  • Evalue 2.60e-88
ompR; DNA-binding response regulator, OmpR family (REC-wHTH domains) similarity KEGG
DB: KEGG
  • Identity: 70.3
  • Coverage: 222.0
  • Bit_score: 331
  • Evalue 1.20e-88

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Taxonomy

Methylacidiphilum fumariolicum → Methylacidiphilum → Methylacidiphilales → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 675
ATGCGCATATTGATCGTCGAAGACGAGGCGAAGATCGCCGCATTTGTACGAAAGAGCCTCGAAGAACAAGGGTTTGCCGTAGACACGATCGCCCGCGGCGACGACGCACTCCTGGCCCTAGTCAACCATCCTTATGATGCAGCGGTGCTTGATATTTTCCTACCCGGTCGGGATGGTCTCAGCGTGCTGCGAGCCGTGCGGCGCCGGGGCATCCATCTGCCTGTCCTAGTGCTGACCGCCAGAGGGGAGATCTATGAACGGGTCGAAGGGCTTGAGAGCGGCGCCGACGATTATCTTCCGAAGCCATTTGCGATGGAGGAGCTTATCGCGCGTTTGCGCGCCCTCCTGCGCCGAGCCGCCGGCGTAGGACTTTCCCTCTACCAAGTCGATGACCTGACCTTGAACTTATTAAGCCGGGTTGCGACAAGGGGCGAGCGAAAAATCGAGTTGACGGGCCGGGAGTTTTCTTTCTTGGAGCTCCTGATGCGCTCTCCTGGAAGGGTCTTCACGAGAACCGAGATCTGCGAGCATGTGTGGAACTTTCATTTCGACCCGGGAACCAACCTGGTCGACGTCTACATTCAAAAATTGAGGAAGAAGATCGACGAGGGGGAGAGCCGCAAGCTCATTCAGACCATTCGGGGAATCGGGTATAAAATCGACGTGTCCCCATGA
PROTEIN sequence
Length: 225
MRILIVEDEAKIAAFVRKSLEEQGFAVDTIARGDDALLALVNHPYDAAVLDIFLPGRDGLSVLRAVRRRGIHLPVLVLTARGEIYERVEGLESGADDYLPKPFAMEELIARLRALLRRAAGVGLSLYQVDDLTLNLLSRVATRGERKIELTGREFSFLELLMRSPGRVFTRTEICEHVWNFHFDPGTNLVDVYIQKLRKKIDEGESRKLIQTIRGIGYKIDVSP*