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ACD50_50

Alias: ACD50_50448.17499.9

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD50_50_1
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(2..1084)
DNA (1083bp) protein (361aa)
seg (db=Seg db_id=seg from=2 to=16)
seg (db=Seg db_id=seg from=130 to=139)
seg (db=Seg db_id=seg from=246 to=261)
seg (db=Seg db_id=seg from=311 to=329)
ACD50_50_2

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1128..2063
DNA (936bp) protein (312aa)
vipB; Vi polysaccharide biosynthesis protein VipB/TviC
CDP-abequose synthase n=18 Tax=Bacillus cereus group RepID=D5TT86_BACTU (db=UNIREF evalue=1.0e-48 bit_score=197.0 identity=34.85 coverage=96.474358974359)
ADH_SHORT (db=PatternScan db_id=PS00061 from=132 to=160 evalue=0.0 interpro_id=IPR020904 interpro_description=Short-chain dehydrogenase/reductase, conserved site GO=Molecular Function: oxidoreductase activity (GO:0016491))
NAD(P)-binding Rossmann-fold domains (db=superfamily db_id=SSF51735 from=2 to=308 evalue=3.6e-74)
ACD50_50_3
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(2029..3270)
DNA (1242bp) protein (414aa)
putative glycosyltransferase
transmembrane_regions (db=TMHMM db_id=tmhmm from=88 to=107)
seg (db=Seg db_id=seg from=89 to=106)
transmembrane_regions (db=TMHMM db_id=tmhmm from=119 to=141)
ACD50_50_4
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

3329..5044
DNA (1716bp) protein (572aa)
glycosyltransferase (db=KEGG evalue=4.0e-15 bit_score=87.0 identity=23.81 coverage=73.9510489510489)
transmembrane_regions (db=TMHMM db_id=tmhmm from=356 to=373)
transmembrane_regions (db=TMHMM db_id=tmhmm from=385 to=404)
transmembrane_regions (db=TMHMM db_id=tmhmm from=419 to=441)
ACD50_50_5

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comp(5041..5595)
DNA (555bp) protein (185aa)
seg (db=Seg db_id=seg from=4 to=21)
Uncharacterized protein {ECO:0000313|EMBL:EKD64774.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD50_50_6

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5656..6615
DNA (960bp) protein (320aa)
dTDP-glucose 4,6-dehydratase n=1 Tax=Thermosynechococcus elongatus BP-1 RepID=Q8DL34_THEEB (db=UNIREF evalue=2.0e-94 bit_score=349.0 identity=52.92 coverage=94.0625)
dtdp-glucose 4-6-dehydratase
dtdp-glucose 4-6-dehydratase
DTDP-GLUCOSE 4-6-DEHYDRATASE (db=HMMPanther db_id=PTHR10366:SF35 from=11 to=319 evalue=1.8e-128)
ACD50_50_7

Not on your lists

6617..7885
DNA (1269bp) protein (423aa)
nucleotide sugar dehydrogenase (EC:1.1.1.22)
seg (db=Seg db_id=seg from=16 to=27)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=32)
seg (db=Seg db_id=seg from=282 to=295)
ACD50_50_8
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

7882..8697
DNA (816bp) protein (272aa)
family 2 glycosyl transferase
transmembrane_regions (db=TMHMM db_id=tmhmm from=243 to=265)
Nucleotide-diphospho-sugar transferases (db=superfamily db_id=SSF53448 from=1 to=257 evalue=7.1e-43)
no description (db=Gene3D db_id=G3DSA:3.90.550.10 from=4 to=177 evalue=2.7e-33)
ACD50_50_9
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(8701..9957)
DNA (1257bp) protein (419aa)
seg (db=Seg db_id=seg from=358 to=371)
seg (db=Seg db_id=seg from=188 to=201)
seg (db=Seg db_id=seg from=104 to=116)
seg (db=Seg db_id=seg from=12 to=24)
ACD50_50_10
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(9960..10601)
DNA (642bp) protein (214aa)
Putative S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Thiomonas sp. 3As RepID=D6CVA6_9BURK (db=UNIREF evalue=2.0e-14 bit_score=82.0 identity=24.62 coverage=82.2429906542056)
type 12 methyltransferase
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=16 to=199 evalue=1.1e-31)
no description (db=Gene3D db_id=G3DSA:3.40.50.150 from=38 to=192 evalue=2.2e-18)
ACD50_50_11
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

10659..11369
DNA (711bp) protein (237aa)
putative dolichol-phosphate mannosyltransferase-putative membrane bound sugar transferase involved in LPS biosynthesis
Nucleotide-diphospho-sugar transferases (db=superfamily db_id=SSF53448 from=8 to=233 evalue=5.8e-30)
Glycos_transf_2 (db=HMMPfam db_id=PF00535 from=12 to=127 evalue=4.0e-26 interpro_id=IPR001173 interpro_description=Glycosyl transferase, family 2)
no description (db=Gene3D db_id=G3DSA:3.90.550.10 from=11 to=100 evalue=2.1e-21)
ACD50_50_12

Not on your lists

11366..12076
DNA (711bp) protein (237aa)
WcaA; glycosyltransferases
Nucleotide-diphospho-sugar transferases (db=superfamily db_id=SSF53448 from=10 to=213 evalue=3.3e-37)
GLYCOSYLTRANSFERASE RELATED (db=HMMPanther db_id=PTHR10859 from=17 to=232 evalue=8.5e-30)
Glycos_transf_2 (db=HMMPfam db_id=PF00535 from=12 to=172 evalue=5.5e-28 interpro_id=IPR001173 interpro_description=Glycosyl transferase, family 2)
ACD50_50_13

Not on your lists

12138..13139
DNA (1002bp) protein (334aa)
hypothetical protein
seg (db=Seg db_id=seg from=306 to=317)
dTDP_gluc_dehyt: dTDP-glucose 4,6-deh (db=HMMTigr db_id=TIGR01181 from=3 to=318 evalue=8.6e-171 interpro_id=IPR005888 interpro_description=dTDP-glucose 4,6-dehydratase GO=Molecular Function: dTDP-glucose 4,6-dehydratase activity (GO:0008460), Biological Process: nucleotide-sugar metabolic process (GO:0009225))
DTDP-GLUCOSE 4,6-DEHYDRATASE (db=HMMPanther db_id=PTHR10366:SF41 from=6 to=316 evalue=3.2e-160)
ACD50_50_14

Not on your lists

13130..13519
DNA (390bp) protein (130aa)
conserved protein of unknown function[Include Cupin domain ]
RmlC-like cupins (db=superfamily db_id=SSF51182 from=2 to=123 evalue=7.8e-15 interpro_id=IPR011051 interpro_description=Cupin, RmlC-type)
Cupin_2 (db=HMMPfam db_id=PF07883 from=38 to=103 evalue=2.2e-07 interpro_id=IPR013096 interpro_description=Cupin 2, conserved barrel)
hypothetical protein alias=ACD50_50448.17499.9G0014,ACD50_50448.17499.9_14,ACD50_C00050G00014 id=71814 tax=ACD50 species=unknown genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria organism_group=OP11 organism_desc=OP11
ACD50_50_15
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

13528..14772
DNA (1245bp) protein (415aa)
putative SAM-dependent methyltransferase
putative SAM-dependent methyltransferase
SAM-dependent methyltransferase n=1 Tax=Magnetospirillum magneticum AMB-1 RepID=Q2WB31_MAGSA (db=UNIREF evalue=3.0e-101 bit_score=372.0 identity=46.37 coverage=95.9036144578313)
seg (db=Seg db_id=seg from=274 to=286)
ACD50_50_16
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

14765..15817
DNA (1053bp) protein (351aa)
hypothetical protein
hypothetical protein
NAD-dependent epimerase/dehydratase n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U1A2_9PROT (db=UNIREF evalue=2.0e-94 bit_score=349.0 identity=50.44 coverage=96.5811965811966)
transmembrane_regions (db=TMHMM db_id=tmhmm from=27 to=49)
ACD50_50_17
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

15796..17262
DNA (1467bp) protein (489aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
seg (db=Seg db_id=seg from=476 to=488)
seg (db=Seg db_id=seg from=370 to=381)
seg (db=Seg db_id=seg from=7 to=16)
ACD50_50_18

Not on your lists

17267..17533
DNA (267bp) protein (89aa)
glycosyl transferase family 2 protein
Nucleotide-diphospho-sugar transferases (db=superfamily db_id=SSF53448 from=1 to=88 evalue=1.6e-11)
Glycos_transf_2 (db=HMMPfam db_id=PF00535 from=9 to=88 evalue=3.3e-08 interpro_id=IPR001173 interpro_description=Glycosyl transferase, family 2)
glycosyl transferase family 2 alias=ACD50_50448.17499.9G0018,ACD50_50448.17499.9_18,ACD50_C00050G00018 id=71813 tax=ACD50 species=Kribbella flavida genus=Kribbella taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria organism_group=OP11 organism_desc=OP11
Displaying 18 items

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