ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

cn_combo_scaffold_150_8

Organism: CN-SCN_Pelagibacterium_44x

megabin RP 51 / 55 MC: 39 BSCG 50 / 51 MC: 37 ASCG 13 / 38 MC: 11
Location: 6906..7580

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, GntR family n=1 Tax=Rhizobium sp. IRBG74 RepID=U4Q510_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 86.2
  • Coverage: 224.0
  • Bit_score: 383
  • Evalue 1.20e-103
Transcriptional regulator, GntR family similarity KEGG
DB: KEGG
  • Identity: 85.7
  • Coverage: 224.0
  • Bit_score: 382
  • Evalue 9.80e-104
  • rbh
Transcriptional regulator, GntR family {ECO:0000313|EMBL:CDI12318.1}; TaxID=424182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhi similarity UNIPROT
DB: UniProtKB
  • Identity: 85.7
  • Coverage: 224.0
  • Bit_score: 382
  • Evalue 4.90e-103

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium sp. IRBG74 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 675
GTGGCGAGCAAGCCGGTTACGCGCGAAAATCTGTCGACGCAGCTCTACAACAATCTCAGGACGTCCCTGATGGACGGGCAATACGCGCCTGGCCAGAAGCTGACCATTTCAGGCATTGCCGAGGAGTGCGGCACCAGCATCACCCCGGTGCGCGAGGCCATTTTCCGCCTGGTGAGCGAGCGGGCGCTGGAAGTCCGCGCGGCCACCTCCGTTCAGGTTCCCAACCTGTCGGCCCAGAGCCTGCGCGAAGTGCAGCGCATCCGCGTCGAGCTGGAAGGGACGGCGGCCCAGCGGGCGGCCGAGCTGGCCACCAAGGCCGACCTCAAGGCGCTCAAGGCCATCAATGCCGATTTCATCAAGGCGGCGGCGAACAATCCGGCCAAGGCCAGCGTTCTCAATCGAGACTTCCACTTCGCCGTGCTCCGCCTGGCGCAGATGCCGATCCTGGAGGGCATTTGCGAGAATATGTGGGTGCTGATGGGCCCCTTCCTACGCACCTTCCACGATCGCATGCCGGTGCGTCAGCTCTCGGGCGACAATCACAAGCATTACGACCTGATCGCCGCGCTCGAAGCGGGCGATCCCGAGCGCAGCCGTGCCGCCATGCAGGAGGATATCCGCTGGGGCGAGGAGATGGTGCGCACGCTCGAAACCGAACGCAGCACGGCCGTCTAG
PROTEIN sequence
Length: 225
VASKPVTRENLSTQLYNNLRTSLMDGQYAPGQKLTISGIAEECGTSITPVREAIFRLVSERALEVRAATSVQVPNLSAQSLREVQRIRVELEGTAAQRAAELATKADLKALKAINADFIKAAANNPAKASVLNRDFHFAVLRLAQMPILEGICENMWVLMGPFLRTFHDRMPVRQLSGDNHKHYDLIAALEAGDPERSRAAMQEDIRWGEEMVRTLETERSTAV*