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cn_combo_scaffold_1791_5

Organism: CN-SCN_Pelagibacterium_44x

megabin RP 51 / 55 MC: 39 BSCG 50 / 51 MC: 37 ASCG 13 / 38 MC: 11
Location: 2775..4274

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-54 factor n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8L4_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 65.8
  • Coverage: 497.0
  • Bit_score: 634
  • Evalue 6.60e-179
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5 similarity UNIPROT
DB: UniProtKB
  • Identity: 78.4
  • Coverage: 499.0
  • Bit_score: 778
  • Evalue 5.20e-222
RNA polymerase sigma-54 factor RpoN similarity KEGG
DB: KEGG
  • Identity: 65.8
  • Coverage: 497.0
  • Bit_score: 634
  • Evalue 1.90e-179

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Taxonomy

Devosia sp. LC5 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1500
ATGGCCCTGACGCCGCGTCTGGAATTTCGGCAGGCCCAGAGCCTGACGCTGACGCCGCAATTGATGCAGTCGATTCGGCTGCTGCAATTGAGCCATATCGAGCTCAACGCCTTCATCGACGCCGAATTGCTGCGCAATCCCCTGCTCGAGCGCGAGGATGGCGGCGCAGAGGGCGAGCCGGCCGAATTGCCCGAGCCGCCGGCCGAGCTCAGCGCCTATGAGGACACCGTCGCCCATGGCGAGCGCATCCAGGACGCCGGCTCCATCGCCGATAGCCTCGACACCGCCGTCGACAACGTCTTTCCCGACCAGGGCGCTCAGGACCGGCTGGTCCCCTCGTCGCGGATCGAGGCCGGGAGCAGCGGCGCGGAAGCGCCGGATCTGGACCAGTTCGTGGCCGCCCGGCCCCTGCTTGGCGATCACCTGCGTGCCCAGGCCAATATGCTGTTGCGCCACGCGTCCGACCGGCTGATCGCCCATCACCTCATCGACGGTCTCGACGAGGCCGGCTATCTCGCCACCGGGATCGAGGCCATCGCCGAGCAGTTGGGGGCCGAAACTGCCGATGTCGAGGCGGTGCTCGGGGCCTTGCAGGGGTGCGATCCGGTGGGGGTCTTTGCCCGTTCGGTGCGGGAGTGCCTCGCCATCCAGTTGCGCGAGCGCGACCGGCTCGACCCGATCATGGCGCGCCTGCTCGAGCATCTCAACCTGCTCGCCGCCCATGACATGGCGGGCCTGCTGCGCGCAGTGGGTTGCGACCGTGAGGACCTGGCCGACATGCTGGCCGAATTGCGCCAGCTCGATCCCCGGCCGGGCCTGGCCTTCGATAGCGGGCCGGTGGAGGCGGTGGTGCCCGATGTCTTCGTGCGGCAGGGGCCGGACGGGGCCTGGCGGATCGAGCTCAACAGCGACGTGCTGCCGCGCGTCCTGGTCGATCGCAGCTATTACACATCCGTCAGCGGCAAGGCGCGCGATGCGAAGGAAAAGGCGTTTCTCTCCGATTGCCTCGCCAATGCCAACTGGCTGACGCGGAGCCTGGACCAAAGGGCGCAGACCATTGTGAAGGTAGCGGCGGAGATCGTGCGCCAGCAGGATGGCTTTCTCACCCATGGCATCGCCCATCTCAAGCCGATGACGCTGCGCATGGTGGCCGAGGCCATCGACATGCACGAATCGACCGTCAGCCGCGTCACCACCAGCAAATATATGGCGACTCCGCGCGGGCTCTACGAGATGAAATATTTCTTCACCACCGCCATCGCCGCCAGCGACGGGGGAGAGGAGCATTCGGCCGAAGCGGTGCGCCATCGCATCCGCCAGTTGATCGAGGCCGAGCCTGCCAATGACATCCTGTCGGACGATACCATCGCCGCGCTGCTGAAAAAGGAGCGGGGGATCGACATCGCCCGCCGCACCGTGGCCAAATACCGCGAGGGCATGAACATCCCTTCCTCGGTCATCCGTCGCCGACAGAAAAAGGGCCTGGCACAAGCCCTTTGA
PROTEIN sequence
Length: 500
MALTPRLEFRQAQSLTLTPQLMQSIRLLQLSHIELNAFIDAELLRNPLLEREDGGAEGEPAELPEPPAELSAYEDTVAHGERIQDAGSIADSLDTAVDNVFPDQGAQDRLVPSSRIEAGSSGAEAPDLDQFVAARPLLGDHLRAQANMLLRHASDRLIAHHLIDGLDEAGYLATGIEAIAEQLGAETADVEAVLGALQGCDPVGVFARSVRECLAIQLRERDRLDPIMARLLEHLNLLAAHDMAGLLRAVGCDREDLADMLAELRQLDPRPGLAFDSGPVEAVVPDVFVRQGPDGAWRIELNSDVLPRVLVDRSYYTSVSGKARDAKEKAFLSDCLANANWLTRSLDQRAQTIVKVAAEIVRQQDGFLTHGIAHLKPMTLRMVAEAIDMHESTVSRVTTSKYMATPRGLYEMKYFFTTAIAASDGGEEHSAEAVRHRIRQLIEAEPANDILSDDTIAALLKKERGIDIARRTVAKYREGMNIPSSVIRRRQKKGLAQAL*