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cn_combo_scaffold_5948_12

Organism: CN-SCN_Phenylobacterium_14x

near complete RP 44 / 55 MC: 2 BSCG 42 / 51 MC: 2 ASCG 7 / 38
Location: 9731..10072

Top 3 Functional Annotations

Value Algorithm Source
Integrase catalytic region n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UI28_RHIRD similarity UNIREF
DB: UNIREF100
  • Identity: 93.9
  • Coverage: 114.0
  • Bit_score: 218
  • Evalue 4.40e-54
Integrase catalytic region {ECO:0000313|EMBL:EGP54247.1}; TaxID=1050720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; similarity UNIPROT
DB: UniProtKB
  • Identity: 93.9
  • Coverage: 114.0
  • Bit_score: 218
  • Evalue 6.20e-54
putative IS21 family transposase, OrfA similarity KEGG
DB: KEGG
  • Identity: 90.4
  • Coverage: 114.0
  • Bit_score: 210
  • Evalue 2.00e-52

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 342
ATGCTTATTGTGGAAACAATTCTGAAGATAAGACGGCTGGCCGATGTTCAGGGCAAGACGATCAAGGCGATCTGCCTGGAGCTTGGCATATCGCGGAAAGTGGTGCGGAAGGTTCTGCGCAGCGATGAGACGGAGTTCAAATACGAGCGGACCCGTCAACCTCAGCCGAAGCTGGGGCCATGGCGAGATCAACTGGATGGAATGCTGCTCGCCAATGAGGCCAAATCCTCTCGCGAACGGCTGACACTGATCCGGCTGTACGAGGACTTGCGGGACCTGGGTTACGAGGGCGGTTACGATACCGTCCGGCGCTACGCCCGGACCTGGGCGAAGGAGCGCGGG
PROTEIN sequence
Length: 114
MLIVETILKIRRLADVQGKTIKAICLELGISRKVVRKVLRSDETEFKYERTRQPQPKLGPWRDQLDGMLLANEAKSSRERLTLIRLYEDLRDLGYEGGYDTVRRYARTWAKERG