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ACD51_31

Alias: ACD51_19555.31490.9

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD51_31_1
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(3..734)
DNA (732bp) protein (244aa)
Transketolase subunit A n=3 Tax=Fusobacterium RepID=C3W9C8_FUSMR (db=UNIREF evalue=2.0e-69 bit_score=265.0 identity=54.35 coverage=93.8524590163934)
hypothetical protein
TRANSKETOLASE_1 (db=PatternScan db_id=PS00801 from=20 to=40 evalue=0.0 interpro_id=IPR005474 interpro_description=Transketolase, N-terminal)
no description (db=Gene3D db_id=G3DSA:3.40.50.970 from=14 to=244 evalue=2.2e-73)
ACD51_31_2
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

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882..6098
DNA (5217bp) protein (1739aa)
AAA ATPase
Possible TPR repeat-containing protein (Fragment) n=1 Tax=Corynebacterium pseudogenitalium ATCC 33035 RepID=C2BJ78_9CORY (db=UNIREF evalue=5.0e-08 bit_score=65.5 identity=44.94 coverage=4.77285796434733)
seg (db=Seg db_id=seg from=1173 to=1195)
seg (db=Seg db_id=seg from=1208 to=1214)
ACD51_31_3
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

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comp(6154..6672)
DNA (519bp) protein (173aa)
zinc-binding CMP/dCMP deaminase
CMP/dCMP deaminase, zinc-binding n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K0L8_DESAC (db=UNIREF evalue=1.0e-21 bit_score=105.0 identity=39.37 coverage=72.2543352601156)
seg (db=Seg db_id=seg from=24 to=31)
Cytidine deaminase-like (db=superfamily db_id=SSF53927 from=17 to=160 evalue=2.5e-19 interpro_id=IPR016193 interpro_description=Cytidine deaminase-like GO=Molecular Function: catalytic activity (GO:0003824))
ACD51_31_4
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(6736..7596)
DNA (861bp) protein (287aa)
translation initiation factor IF-2
seg (db=Seg db_id=seg from=21 to=31)
NagB/RpiA/CoA transferase-like (db=superfamily db_id=SSF100950 from=2 to=282 evalue=1.6e-61)
IF-2B (db=HMMPfam db_id=PF01008 from=14 to=270 evalue=3.3e-52 interpro_id=IPR000649 interpro_description=Initiation factor 2B related GO=Biological Process: cellular metabolic process (GO:0044237))
ACD51_31_5

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comp(7650..9134)
DNA (1485bp) protein (495aa)
thymidine phosphorylase
thymidine phosphorylase
Putative thymidine phosphorylase n=5 Tax=Legionella pneumophila RepID=TYPH_LEGPH (db=UNIREF evalue=6.0e-101 bit_score=371.0 identity=42.48 coverage=92.3232323232323)
THYMID_PHOSPHORYLASE (db=PatternScan db_id=PS00647 from=196 to=211 evalue=0.0 interpro_id=IPR017872 interpro_description=Pyrimidine-nucleoside phosphorylase, conserved site GO=Biological Process: pyrimidine base metabolic process (GO:0006206))
step 1 in archaeal rubisco pathway. takes AMP and converts it into ribose 1,5 biphosphate. Functions as an AMP phosphorylase kelly wrighton (11/15/12)
ACD51_31_6

Not on your lists

comp(9251..13114)
DNA (3864bp) protein (1288aa)
aminotransferase class V; K00831 phosphoserine aminotransferase [EC:2.6.1.52] (db=KEGG evalue=2.0e-17 bit_score=95.5 identity=25.84 coverage=26.3198757763975)
seg (db=Seg db_id=seg from=707 to=718)
seg (db=Seg db_id=seg from=189 to=205)
PLP-dependent transferases (db=superfamily db_id=SSF53383 from=880 to=1260 evalue=8.1e-25 interpro_id=IPR015424 interpro_description=Pyridoxal phosphate-dependent transferase, major domain)
ACD51_31_7

Not on your lists

comp(13205..13996)
DNA (792bp) protein (264aa)
pyruvate formate-lyase activating enzyme (EC:1.97.1.4)
RADICAL_ACTIVATING (db=PatternScan db_id=PS01087 from=38 to=59 evalue=0.0 interpro_id=IPR001989 interpro_description=Radical-activating enzyme, conserved site GO=Biological Process: oxygen and reactive oxygen species metabolic process (GO:0006800), Molecular Function: oxidoreductase activity (GO:0016491), Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539), Biological Process: oxidation reduction (GO:0055114))
PFLA: pyruvate formate-lyase 1-activating en (db=HMMTigr db_id=TIGR02493 from=26 to=257 evalue=4.3e-105 interpro_id=IPR012838 interpro_description=Pyruvate formate-lyase activating GO=Molecular Function: [formate-C-acetyltransferase]-activating enzyme activity (GO:0043365), Biological Process: oxidation reduction (GO:0055114))
Radical_SAM (db=HMMPfam db_id=PF04055 from=46 to=196 evalue=1.7e-30 interpro_id=IPR007197 interpro_description=Radical SAM GO=Molecular Function: catalytic activity (GO:0003824), Molecular Function: iron-sulfur cluster binding (GO:0051536))
ACD51_31_8

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comp(14000..16309)
DNA (2310bp) protein (770aa)
formate acetyltransferase (EC:2.3.1.54)
formate acetyltransferase (EC:2.3.1.54)
Formate acetyltransferase n=2 Tax=Synechococcus RepID=Q2JPN9_SYNJB (db=UNIREF evalue=0.0 bit_score=899.0 identity=60.26 coverage=96.6233766233766)
seg (db=Seg db_id=seg from=192 to=203)
ACD51_31_9

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comp(16278..17501)
DNA (1224bp) protein (408aa)
Acetate kinase n=6 Tax=Thermotogaceae RepID=ACKA_THEP1 (db=UNIREF evalue=3.0e-104 bit_score=382.0 identity=48.63 coverage=95.5882352941177)
acetate kinase
acetate kinase
ACETATE_KINASE_1 (db=PatternScan db_id=PS01075 from=3 to=14 evalue=0.0 interpro_id=IPR000890 interpro_description=Acetate/butyrate kinase GO=Cellular Component: intracellular (GO:0005622), Biological Process: metabolic process (GO:0008152), Molecular Function: kinase activity (GO:0016301), Biological Process: phosphorylation (GO:0016310), Molecular Function: phosphotransferase activity, carboxyl group as acceptor (GO:0016774))
ACD51_31_10
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(17536..18561)
DNA (1026bp) protein (342aa)
Phosphate acetyltransferase n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B1V0_SULD5 (db=UNIREF evalue=4.0e-84 bit_score=315.0 identity=48.15 coverage=93.5672514619883)
phosphate acetyltransferase
phosphate acetyltransferase
pta: phosphate acetyltransferase (db=HMMTigr db_id=TIGR00651 from=19 to=323 evalue=1.1e-124 interpro_id=IPR004614 interpro_description=Phosphate acetyltransferase GO=Molecular Function: acetyltransferase activity (GO:0016407))
ACD51_31_11

Not on your lists

comp(18644..24154)
DNA (5511bp) protein (1837aa)
VCBS repeat-containing protein
Na-Ca exchanger/integrin-beta4 n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C3F88 (db=UNIREF evalue=7.0e-31 bit_score=141.0 identity=36.12 coverage=26.7283614589004)
coiled-coil (db=Coil db_id=coil from=1815 to=1836 evalue=NA)
seg (db=Seg db_id=seg from=102 to=124)
ACD51_31_12

Not on your lists

comp(24237..24806)
DNA (570bp) protein (190aa)
seg (db=Seg db_id=seg from=15 to=25)
PHP domain-like (db=superfamily db_id=SSF89550 from=8 to=160 evalue=1.5e-17 interpro_id=IPR016195 interpro_description=Polymerase/histidinol phosphatase-like GO=Molecular Function: catalytic activity (GO:0003824))
Uncharacterized protein {ECO:0000313|EMBL:EKD64098.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD51_31_13

Not on your lists

comp(25024..25335)
DNA (312bp) protein (104aa)
seg (db=Seg db_id=seg from=88 to=99)
seg (db=Seg db_id=seg from=2 to=18)
coiled-coil (db=Coil db_id=coil from=55 to=76 evalue=NA)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=20 evalue=6.0)
ACD51_31_14

Not on your lists

comp(25332..25658)
DNA (327bp) protein (109aa)
25332..25658 - (rbs_motif=TAA rbs_spacer=7bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD64100.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD51_31_15
CG_PER_02, Peregrinibacteria, Bacteria

Not on your lists

comp(25701..26483)
DNA (783bp) protein (261aa)
coiled-coil (db=Coil db_id=coil from=16 to=51 evalue=NA)
seg (db=Seg db_id=seg from=8 to=27)
seg (db=Seg db_id=seg from=122 to=135)
coiled-coil 16..51 Tax=CG_PER_02
ACD51_31_16

Not on your lists

comp(26531..28015)
DNA (1485bp) protein (495aa)
glutamyl/glutaminyl-tRNA synthetase
glutamyl/glutaminyl-tRNA synthetase
Glutamyl-tRNA synthetase n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=SYE_ALKOO (db=UNIREF evalue=2.0e-127 bit_score=459.0 identity=46.57 coverage=98.7878787878788)
seg (db=Seg db_id=seg from=407 to=424)
ACD51_31_17

Not on your lists

28155..30428
DNA (2274bp) protein (758aa)
FtsK/SpoIIIE family protein
FtsK/SpoIIIE family protein
Cell divisionFtsK/SpoIIIE n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XLE2_CALS8 (db=UNIREF evalue=3.0e-135 bit_score=486.0 identity=36.44 coverage=94.1952506596306)
seg (db=Seg db_id=seg from=252 to=282)
ACD51_31_18

Not on your lists

30618..31436
DNA (819bp) protein (273aa)
30618..31436 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD64086.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 18 items

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