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ACD51_8_28

Organism: PER_ACD51

near complete RP 49 / 55 MC: 15 BSCG 46 / 51 MC: 5 ASCG 0 / 38
Location: 27454..28092

Top 3 Functional Annotations

Value Algorithm Source
RluA family pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 40.5
  • Coverage: 220.0
  • Bit_score: 143
  • Evalue 9.50e-32
PSI_RLU (db=PatternScan db_id=PS01129 from=56 to=70 evalue=0.0 interpro_id=IPR006224 interpro_description=Pseudouridine synthase, RluC/RluD, conserved site GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) iprscan interpro
DB: PatternScan
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 0.0
Pseudouridine synthase (db=superfamily db_id=SSF55120 from=4 to=209 evalue=2.5e-48 interpro_id=IPR020103 interpro_description=Pseudouridine synthase, catalytic domain GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 2.50e-48

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Taxonomy

RIFOXYC2_FULL_Peregrinibacteria_41_22_curated → Peregrinibacteria → Bacteria

Sequences

DNA sequence
Length: 639
ATGGACGGAATTAACATCATCTATGAAGACCCTTACTTGCTTGCAATAGATAAACCGGAAGGTATTGCTTCCGTACCTGCGGAATACATACCGGAAGGGAAAACAATACAAGGCATGGTAAGAAGATGGGCTGATTTGAATGGAAAAGATTTCAAACCATATCTCTTACACAGATTGGACAAGAACACCTCCGGCGTAATTATGTTTGGCAAATATGATAAAAACAGGAATCAGCTTGAAAGCATTTTTCAGCAAAAAGATACGAAAAAAACCTACCTTGCACTGGTAAAAGGGGTTCCACGATTCGAAGAAAGTACAATAAAAATACCTCTAGAAGCACGCACGGCCGCAAAAAAAGTACCGGCAATAACGCATTACAAAATTCTCAAAAAATTCGGACCTACATCGCTACTGGAAGTTGTAATAGAAACGGGCAGAAAACATCAGATCAGAAAACATCTGGCAATGATAAAAAATCCTCTCGTACTAGATCCTGAATACGGAGACAGGATGTTCAATAACAATTACCAACGCAAACTAAAAGGGAAAGGTAAATTCTTTCTGCGCGCATGGAAAATCGAATTCACACATCCGATTACGAAAGAAAAGATAAAAATAGAAGTGAATACAACTATTTAG
PROTEIN sequence
Length: 213
MDGINIIYEDPYLLAIDKPEGIASVPAEYIPEGKTIQGMVRRWADLNGKDFKPYLLHRLDKNTSGVIMFGKYDKNRNQLESIFQQKDTKKTYLALVKGVPRFEESTIKIPLEARTAAKKVPAITHYKILKKFGPTSLLEVVIETGRKHQIRKHLAMIKNPLVLDPEYGDRMFNNNYQRKLKGKGKFFLRAWKIEFTHPITKEKIKIEVNTTI*