ggKbase home page

ACD51_8_28 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
RluA family pseudouridine synthase similarity KEGG
DB: KEGG
40.5 220.0 143 9.50e-32 afw:Anae109_0059
PSI_RLU (db=PatternScan db_id=PS01129 from=56 to=70 evalue=0.0 interpro_id=IPR006224 interpro_description=Pseudouridine synthase, RluC/RluD, conserved site GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) iprscan interpro
DB: PatternScan
null null null 0.0 afw:Anae109_0059
Pseudouridine synthase (db=superfamily db_id=SSF55120 from=4 to=209 evalue=2.5e-48 interpro_id=IPR020103 interpro_description=Pseudouridine synthase, catalytic domain GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) iprscan interpro
DB: superfamily
null null null 2.50e-48 afw:Anae109_0059
RIBOSOMAL PSEUDOURIDINE SYNTHASE (db=HMMPanther db_id=PTHR10436 from=4 to=208 evalue=8.3e-44) iprscan interpro
DB: HMMPanther
null null null 8.27e-44 afw:Anae109_0059
PseudoU_synth_2 (db=HMMPfam db_id=PF00849 from=13 to=155 evalue=2.3e-29 interpro_id=IPR006145 interpro_description=Pseudouridine synthase, RsuA and RluB/C/D/E/F GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) iprscan interpro
DB: HMMPfam
null null null 2.30e-29 afw:Anae109_0059
RluA family pseudouridine synthase (EC:3.2.1.17); K06179 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] Tax=RIFOXYC2_FULL_Peregrinibacteria_41_22_curated UNIPROT
DB: UniProtKB
100.0 212.0 431 8.70e-118 ggdbv1_89866111
RluA family pseudouridine synthase (EC:3.2.1.17); K06179 ribosomal large subunit pseudouridine synthase C [EC:5.4.99.12] alias=ACD51_69595.90668.11G0028,ACD51_69595.90668.11_28,ACD51_C00008G00028 id=73137 tax=ACD51 species=Anaeromyxobacter sp. Fw109-5 genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria organism_group=PER organism_desc=PER similarity UNIREF
DB: UNIREF90
100.0 null 430 2.50e-118 afw:Anae109_0059