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cn_combo_scaffold_1559_24

Organism: CN-SCN_Pseudonocardia_51x

partial RP 9 / 55 MC: 1 BSCG 8 / 51 MC: 1 ASCG 4 / 38
Location: comp(25547..27406)

Top 3 Functional Annotations

Value Algorithm Source
copper resistance protein D n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDD02 similarity UNIREF
DB: UNIREF100
  • Identity: 42.3
  • Coverage: 600.0
  • Bit_score: 450
  • Evalue 3.80e-123
Copper resistance protein CopD {ECO:0000313|EMBL:KDN22780.1}; TaxID=287986 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica similarity UNIPROT
DB: UniProtKB
  • Identity: 39.1
  • Coverage: 617.0
  • Bit_score: 385
  • Evalue 1.60e-103
copper resistance transporter similarity KEGG
DB: KEGG
  • Identity: 36.8
  • Coverage: 633.0
  • Bit_score: 380
  • Evalue 7.90e-103

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Taxonomy

Amycolatopsis rifamycinica → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1860
ATGCTGGTCGCTGCGCTGGCGGTGGGACGGTTTGCGCCGAGCGTGGGACTGCTCAACGGGATGGGCGACCTCGGCCCGGTTGTCGACGCCGGGCAGCCGCTGGCCCGAGGAGTCGCTCTGGCCGCGGGTGCGATGACGGTCGGCCACCTCCTGCTCGCCGCGGTGTACCGGCCGGGCGATTGTCAGGGGGCAGTGAGTCCCGAGGGCTACCGAGCGCTGCACGCGGTACGTGGGTGGGCGCTGCTGCAGGTCGGAGCCTCGCTCGTTGCCGCGTTGCTCACGGTTGCGGAGAACACGGCGATCACGCCCGCGGCGCTGCTGGCGCGGCCGGCCCTGCTCACCGCGGACGCCGCCGCCTTCGCGCCGGCGATCGGCTGGCTGGCCACAGCCGCCGGTGCCGCACTCGTCGCGATCGGTGCTCTGGTCGCGCTGTCGTGGCGGACCGCGACCGGCCTACTGGTTCTCGCGCTCGCGGCGATGACCCCCATGACACTGACCACCGCGACAGACGCCGATTCCTCCCACGACATCGTCGGCGATGCGATCACTCTGCATGCGCTCGGCGCGCTCGTGTGGTTGGGCAGCGCCGTCGTGGTGGCGTTGCATCTGGCCCGCGGCGGCAGCCGTCCCGACGTCGTGCTGCGCCGACACAGCTTCGTCGCAACGGTCTCGGTATTGGTCTTGGCCTACTCCGGGATCGCCACCCTGGCCGTCACACTGCCGGCGGTGGCCGTGTTCACCACCGCCTATGGGCTGCTGGTCGTCGCGAGCGCGGCGCTGATGCTCGGCGCGGCGCTAGCGGCCATCCGGCTGCGCTCGACGCTGCGCGGACGCGGTGGCGCGCTGGGGCTCCTGACGATCGAGGCCGGACTGTTGATGGCCGCGGCCGGCACCGGAATCGCCCTCCAGCGGCTTTCCCCGCCCGGCCAGCAGGACTACATCCCCACTCGGCTGGTCTACCTGATCGGGTACGACCTGCCCGACAGGCTGACCATCAGCGAACTCGCCCTGCACTGGCGCTGGGACGTGGTGCTTGGACCGACCGCCGTCCTCGCCGCCGGCGGCTATCTCGCCGGCGTTCGGCTACTGGTGGCGCGCGGCGGGTCGTGGCCGTCGAGACGCACCGCGGCCTGGCTCGCCGGGTGCATGGTGCTGCTGGTGGCAAGCTCATCCGGGATCGGCGCCTATGCACCCGCGATGTTCAGCCTGCACATGGTGCAGCACATGCTGCTCGCCACCCTGGTGCCCGTCCTTCTGCTGCTCGGCCACGCGATCAGCCTCCTGTCGGGCCTCGCCGGGCCGCGCGGTCGAGCGCGGATCGAGAGCCTGCTCGATGCACCGGCGCTACGGGTCGTTCGGCACCCCGTCGTCGCGCTGGCCGCGGTGGGTGGCACCTTGTTCGCGCTGTACCCCACCGGCCTCTACGGGGCGATCCTCCAGGAACACTGGGCGCACATCGGCATGGACGTCGCATTCCTCGGGACCGGCCTCGTCCTCTACTGGCCCGTCCTCGGTCGGGCGCTGCCCGATGGCGGCCTGCCCGCGCTCGGACGAATCGTCATCGTCTTCGCCGTCATGGGCCTGCACGCCGCATTCGCCGTCTGGCTTCTCGCCCAGCCGTCCCCGGTCGCCGCGCCGTTCTTCTCCTCCGTCCAGCTACCGTTCGTCCCCGACCTCCTAGCCGACCAACGCCGCGGCGCGGTCATGTCCTGGATTCTCGGCGAGGTACCGACCGTGATCGCCGTCGCCGCGCTCGTCACTACCTGGAACCGATCCGACCGCGGCGACCGGTCTGCCTGGCAGCCGGCAGGCCCGGACGGGGTTCCCGACCTCCATCCGAGGAGCGCACTACCGCGATGA
PROTEIN sequence
Length: 620
MLVAALAVGRFAPSVGLLNGMGDLGPVVDAGQPLARGVALAAGAMTVGHLLLAAVYRPGDCQGAVSPEGYRALHAVRGWALLQVGASLVAALLTVAENTAITPAALLARPALLTADAAAFAPAIGWLATAAGAALVAIGALVALSWRTATGLLVLALAAMTPMTLTTATDADSSHDIVGDAITLHALGALVWLGSAVVVALHLARGGSRPDVVLRRHSFVATVSVLVLAYSGIATLAVTLPAVAVFTTAYGLLVVASAALMLGAALAAIRLRSTLRGRGGALGLLTIEAGLLMAAAGTGIALQRLSPPGQQDYIPTRLVYLIGYDLPDRLTISELALHWRWDVVLGPTAVLAAGGYLAGVRLLVARGGSWPSRRTAAWLAGCMVLLVASSSGIGAYAPAMFSLHMVQHMLLATLVPVLLLLGHAISLLSGLAGPRGRARIESLLDAPALRVVRHPVVALAAVGGTLFALYPTGLYGAILQEHWAHIGMDVAFLGTGLVLYWPVLGRALPDGGLPALGRIVIVFAVMGLHAAFAVWLLAQPSPVAAPFFSSVQLPFVPDLLADQRRGAVMSWILGEVPTVIAVAALVTTWNRSDRGDRSAWQPAGPDGVPDLHPRSALPR*