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cn_combo_scaffold_3524_4

Organism: CN-SCN_Pseudonocardia_51x

partial RP 9 / 55 MC: 1 BSCG 8 / 51 MC: 1 ASCG 4 / 38
Location: 2992..5841

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, winged helix family n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X7W6_NAKMY similarity UNIREF
DB: UNIREF100
  • Identity: 46.9
  • Coverage: 944.0
  • Bit_score: 740
  • Evalue 2.80e-210
winged helix family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 46.9
  • Coverage: 944.0
  • Bit_score: 740
  • Evalue 7.90e-211
  • rbh
Transcriptional regulator, winged helix family {ECO:0000313|EMBL:ACV80969.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multip similarity UNIPROT
DB: UniProtKB
  • Identity: 46.9
  • Coverage: 944.0
  • Bit_score: 740
  • Evalue 3.90e-210

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Taxonomy

Nakamurella multipartita → Nakamurella → Nakamurellales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2850
GTGCGGCTCGTGCAGTTTCGCGATCTCGGGCCACTGCTGGTCGACGACGGGGTGGCCCGTCCGCCGGGTGGGGCGCGGCTGTCCACGGTGCTCGCGGTGCTGCTCTCGCGGGTCGGGGAGCCGGTCGGCACGGCGACGCTGGCCGAGGCGGTGTGGGGTGCCGAGCCGCCCGCCCGGGCAGGCAAGGTCCTGGAGTCGCACGTCTGGCGCCTGCGGAAGGTGCTGGAGCCCGACCGGGGTCCGCGCGCGCTGCCGACCGTCCTGCAGACCGATCCCCTCGGCTACCGGCTCGTCGTCGCCCCCGACCGGCTCGACTCGCACCGGCTGGCCACGGCGGCCGACGCGGCCCGCGCGTCGCTGGCCGCGGGCCGCCACGACGACGTGGTGGCGGTGAGCGCGGAGGCGCTGGCGTTGTGGCGCGGGTCGTTCTGCTCCGACGTCGCCGACACCGGGTGGCTGGCGCCGGTCCGGGAGAGGTTCTCGGAGCTGCGGCTGGCGCTCGTCGAGCAGCGGGCGGCGGCGCTGGTCGCGCTGGGCCAGCCGGAGCGTGCGGCCCACGAGCTGGCGGCCGCGGTGGCGGAGCACCCGTTGCGGGAACCGTTGTGGGAGTTGCGGATCCTGGCGCTGTACCGGGCGGGTCGGCAGGCGGCGGCGCTCACCGCGTACGACACGGTCCGCCGGATGCTGGCCGACGAGCTCGGGGTCGATCCCGGGCCCGCGCTGGCCGCGCTGCACCAGCGGATCCTGGTGCAGGACGACGCGTTGACGCCTGCGCCCGCGGCTCCGGCACCCACGGTTCCGGTGCGGCTGCCGAGCAGGCGCGCCAGCATCCTGGGCCGGGAGGCCGACCTGGACCGGGTGGCCGCACGCCTTGCGCCGCAGGCGCTGGTCACGCTGCTGGGCCCGGGTGGGGTCGGCAAGACCCGGCTGGCGACGGAGGTGGCGTTCGCCGTCCGGGACCGGTTCCCCGCGGGGGTGTGGTTCGTCGACCTCGGCGCGGTGGCGGCCCCGGCGTCGGTCCCGGTGGCGGTCGCGGACGTGCTCGCGCCAACTCCGGTCGCGGGGACAACCCCGGAGGAGCTGGTGCTCGGCCGGCTCGCCGACCGGCAGGCGCTGCTGGTGATGGACAACTGTGAACACGTCCTCGGGGCCGTCGCGGACTTCGTCGGCCGGCTGCTCGACCGGTGCCCGTCGGCGGCGGTGCTGGCGACGAGCCGTGAACCGCTGGAGCTGCCGGGCGAGCAGCGCGTCCCGCTGGGGCCGCTCGCCACGGACGCCGCGGTCCGGCTGTTCCTCGACCGTTCCGCCGACGCCCGCCCCGACGACGACCGGGTCGACCCCACCGGCCCGGACCGCCCGCTGCTGCGACGGATCTGCGCGGCCGTCGGCGGGTTGCCGCTGGGCATCGAGCTGGCCGCCGCGCGCACCCGGACGTTCGAGCTCGCGGAGATCGCCGACAGCCTCGACCGTGCGCCCGGCAGGCTCTCGCGCAGCGGTCCCGGGCCCGACCGGCACGCCACCCTGTTGGAGACGGTCGACTGGAGCTACCGGCTCGCCGGCCCGGACGAGCAGATCCTGCACCGCAGGCTGGCCGTCCTGACCGGCGTGTTCACCGTCGACGCCGCCGCCGCGCTGTGTGCCGTGGAACCGCTGCATCCCGACCAGGCCCTCGACGTCCTGGGCGGGCTGGTGCACCGCTCGTTGGTCACCGCGCGGCGCACACCCGGCCGCGCGACGTCCTTCGCGCAGCTCGTGCCGATCCGGGCGCACGCCGACCACACCCTCACCCCGACGGAACGGGACGCCGTCGTCGCCGCCCGCGACCGGTGGGTGCTCGACCACGTCCTGGCCGGGCCGTTGCCGGGCGCCGCCGGACAGCGGGCGTTCTACGACTGGCTCGACGACAACCTCGCCGCTGTGCGCACCGTGCTGCGGTCGCTGCTGGTGGAGCGGCCCGCTCCGGCGGGGATCGAGCTCGCCGCGCGGCTGGTCTTCCACTGGCACGACCGGGAGCGGCTCGTCGAGCTCGTGCGCTGGGCGGAGCTGGTGGGTGACGCGTCCAGGGTCGTCGGTGTGACCGACGTGGCCCGCGCGGTGCAGGGCTGCGCGGCCGCCCTCGGCCACGACGCCGACGCCGCCACCGCGTTCTTCTCCGACGCCGTGCCTGCGCTGGCCGCCGCTCCGCCGCCGCGACGCGCCGATGCGGCCCGGCTGCTGTTCGTCGTCTCGGTCTGCGCATGGACCGGTGACCTCGTCGAGTGGGCGACGACGGCCGCGTCGGCCGCCGTCACGCTCGCCGACCAGGCCGGCGACCCGCACACCGCGCAGGGCGGGCGGGCCGTGCTGGCCGCATCGGCGCTGCTCGGCGGCGACGGCGACCGTGCCGTCGCGCTGGCCGATGCCGTGCTCGCCGACCCGACCGGCAACCAGCTCGCGATCCTGTTCGCCGAGGTCACGCACTCGATCACCGCCCAGTTCGGGGGCGACGGCGAGACCGGTCTGCGCCACGGCGATGCCGTGCTGCGCAGCCAGCTGCGGCTCGGTACCCGCAACTTCGCCGACTCGTTCGAGTCCCGCGGCGCCCACCTGCTGAACGCCGGCCAGCTCGACGAGGCCGCCCGTTTCTACGCGCTGTCGTCGGCGCTCAGCGCCGGCCAGGGCCGGGGATGGCCCTGGCACCCGGGCACCGACGAGCGGCTCACGACCCTGCGCGCGGCCCTCGGTCCGGCGGAGTTCGGCAAACACTGGGACAGCGGCCTGCGGATGGCCGGACTCGATCCCACCGAGCTCGTGGCGGGGCTGGTCGGTGACCTCGGCGAGCCCGCGCGGGAGGCACTGAGAGCGCCGTGA
PROTEIN sequence
Length: 950
VRLVQFRDLGPLLVDDGVARPPGGARLSTVLAVLLSRVGEPVGTATLAEAVWGAEPPARAGKVLESHVWRLRKVLEPDRGPRALPTVLQTDPLGYRLVVAPDRLDSHRLATAADAARASLAAGRHDDVVAVSAEALALWRGSFCSDVADTGWLAPVRERFSELRLALVEQRAAALVALGQPERAAHELAAAVAEHPLREPLWELRILALYRAGRQAAALTAYDTVRRMLADELGVDPGPALAALHQRILVQDDALTPAPAAPAPTVPVRLPSRRASILGREADLDRVAARLAPQALVTLLGPGGVGKTRLATEVAFAVRDRFPAGVWFVDLGAVAAPASVPVAVADVLAPTPVAGTTPEELVLGRLADRQALLVMDNCEHVLGAVADFVGRLLDRCPSAAVLATSREPLELPGEQRVPLGPLATDAAVRLFLDRSADARPDDDRVDPTGPDRPLLRRICAAVGGLPLGIELAAARTRTFELAEIADSLDRAPGRLSRSGPGPDRHATLLETVDWSYRLAGPDEQILHRRLAVLTGVFTVDAAAALCAVEPLHPDQALDVLGGLVHRSLVTARRTPGRATSFAQLVPIRAHADHTLTPTERDAVVAARDRWVLDHVLAGPLPGAAGQRAFYDWLDDNLAAVRTVLRSLLVERPAPAGIELAARLVFHWHDRERLVELVRWAELVGDASRVVGVTDVARAVQGCAAALGHDADAATAFFSDAVPALAAAPPPRRADAARLLFVVSVCAWTGDLVEWATTAASAAVTLADQAGDPHTAQGGRAVLAASALLGGDGDRAVALADAVLADPTGNQLAILFAEVTHSITAQFGGDGETGLRHGDAVLRSQLRLGTRNFADSFESRGAHLLNAGQLDEAARFYALSSALSAGQGRGWPWHPGTDERLTTLRAALGPAEFGKHWDSGLRMAGLDPTELVAGLVGDLGEPAREALRAP*