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This organism can only be binned in the context of its binning project GD2017-1_S_p1_S3_Biohub_170907. Please contact the project owner (coralline@gmail.com) to become a member and gain access.

cn_combo_scaffold_7093_6

Organism: CN-SCN_Pseudonocardia_51x

partial RP 9 / 55 MC: 1 BSCG 8 / 51 MC: 1 ASCG 4 / 38
Location: comp(5455..5889)

Top 3 Functional Annotations

Value Algorithm Source
Nudix hydrolase family protein n=1 Tax=Mycobacterium marinum str. Europe RepID=S7QU29_MYCMR similarity UNIREF
DB: UNIREF100
  • Identity: 62.1
  • Coverage: 140.0
  • Bit_score: 183
  • Evalue 1.50e-43
NUDIX hydrolase {ECO:0000313|EMBL:ETB14432.1}; TaxID=1391991 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" source="Mycobac similarity UNIPROT
DB: UniProtKB
  • Identity: 59.3
  • Coverage: 140.0
  • Bit_score: 182
  • Evalue 3.70e-43
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 58.6
  • Coverage: 140.0
  • Bit_score: 179
  • Evalue 8.10e-43

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Taxonomy

Mycobacterium avium → Mycobacterium → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 435
ATGAGTGAAGGCCCGACGCACTCCGTCGCAGTCGGGGGAGTCGTTGTCGACGATGCCGGACGGGTGCTGGTGGTCCAGCGCCGCGACAACGGGCGTTGGGAGGCTCCGGGCGGCGTACTCGAACTCGGCGAGACATTCGAACAAGGCGTGCGTCGAGAGGTCGAGGAAGAGACTGGTGTCGACGTCCAGGTCCAGCGCCTAACGGGCGTCTACAAGAACATGAAGCGCGGCGTCGTCGCCCTCGTGTTCCGGTGCCGGCCGATCGGCGGCACGCTTCGCGAGACCGAGGAATCGCAGCAGGTCGAGTGGCTCACTGCCGCCGAGGTCCGCAAGCGCCTGATGCCCGCCTTCGCTGTCCGGATCGAAGACGCTCTGCACGACGGCGTCAGCGTTCGCACACACGACGGCATCAATGTCATAGACGCGTCCAACTAG
PROTEIN sequence
Length: 145
MSEGPTHSVAVGGVVVDDAGRVLVVQRRDNGRWEAPGGVLELGETFEQGVRREVEEETGVDVQVQRLTGVYKNMKRGVVALVFRCRPIGGTLRETEESQQVEWLTAAEVRKRLMPAFAVRIEDALHDGVSVRTHDGINVIDASN*