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cn_combo_scaffold_7700_10

Organism: CN-SCN_Pseudonocardia_51x

partial RP 9 / 55 MC: 1 BSCG 8 / 51 MC: 1 ASCG 4 / 38
Location: 5350..5955

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma70 factor n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI000262710F similarity UNIREF
DB: UNIREF100
  • Identity: 62.6
  • Coverage: 187.0
  • Bit_score: 233
  • Evalue 2.30e-58
rpoE; RNA polymerase sigma factor RpoE similarity KEGG
DB: KEGG
  • Identity: 62.0
  • Coverage: 187.0
  • Bit_score: 230
  • Evalue 3.30e-58
RNA polymerase sigma factor RpoE {ECO:0000313|EMBL:AIJ23533.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanoli similarity UNIPROT
DB: UniProtKB
  • Identity: 62.0
  • Coverage: 187.0
  • Bit_score: 230
  • Evalue 1.60e-57

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Taxonomy

Amycolatopsis methanolica → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 606
ATGAGCGGCGCTGTCCCGGCCGGCCTGGACCAGGCCGCGACGACGGGTGGGCCTGGGCCGGGTGCACCGGTACTCGACGACGCCACCCTGGTGGCCCGGGCCCGCGACGGTGACATCCGGGCCTTCGAACAGCTGGTGCGTCGCTATCAGCGCCGCATCTACCAACTCGCCCTGCGGATGACCGCGAGCCGCGCCGATGCGGAGGACATCACCCAAGAGGTGTTCGTGACCGCGTGGCGGCGACTGCCCGAGCTGCGGGAGGACGCGGCGGTGGTGGGCTGGCTGTACCGCACGGCCACCAACCGCTGTCTGAACCTGCTGCGATCGCGCAAACCCGTCGCCGAGATGGACGAGGCCACTGTGGCCGCCGACCGTCCGGCCGACGACCCGCAGCGGGGAGCCGAGAACACCGCCCGGCGCGAGGCCCTGGTCGAGGCGCTGGGTCAGCTACCGCCCGCCCAGCGCGCGGTCTGGTTGCTGCGTGAGGTGCACGGCCGTTCCTACGACGAGATCGCCGAACTCGTCGACACCACCCCGGACGCGGTGCGCGGGCGCCTGGCCCGCGCCAGGGTCCAACTCGCAGAAAGGATGACGCCGTGGCAGTGA
PROTEIN sequence
Length: 202
MSGAVPAGLDQAATTGGPGPGAPVLDDATLVARARDGDIRAFEQLVRRYQRRIYQLALRMTASRADAEDITQEVFVTAWRRLPELREDAAVVGWLYRTATNRCLNLLRSRKPVAEMDEATVAADRPADDPQRGAENTARREALVEALGQLPPAQRAVWLLREVHGRSYDEIAELVDTTPDAVRGRLARARVQLAERMTPWQ*