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cn_combo_scaffold_7920_2

Organism: CN-SCN_Pseudonocardia_51x

partial RP 9 / 55 MC: 1 BSCG 8 / 51 MC: 1 ASCG 4 / 38
Location: 855..1445

Top 3 Functional Annotations

Value Algorithm Source
Regulatory protein TetR n=1 Tax=Frankia sp. CN3 RepID=G6H5H8_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 64.0
  • Coverage: 200.0
  • Bit_score: 249
  • Evalue 2.40e-63
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 63.0
  • Coverage: 184.0
  • Bit_score: 238
  • Evalue 2.00e-60
Regulatory protein TetR {ECO:0000313|EMBL:ADP81936.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.0
  • Coverage: 184.0
  • Bit_score: 238
  • Evalue 1.00e-59

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Taxonomy

Frankia sp. EuI1c → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 591
ATGTCGGTCACTGTCATCACTAGACTCGGACGCATGGGGCGATGGGAACCGGACGCGCGCGGACGCATGGTCGTCGCTGCCATGGAGCTCTTCGCCGAGCACGGTTTCGACCGGACGACGACGGGCGAGATCGCCGAGCGCGCCGGCGTCACCGAGCGCACGTTCTTCCGGCACTTCGCCGACAAGCGCGAGGTGCTCTTCGACAGCACCCACGCGATGGACCGCCTGACCGTCGACGCGATCGCCACCGCCCCCGACGGCCTCGGCCCGTTCGACGTCGCCCTCGTCGGGATGACGGCGGGCGCGGGACTTCTCGACGACCGCCACGACCACGCCGCCCGACGCGCCCGCATCATCGAGTCCGAGCCGAGCCTGCGGGAACGGGAGCTGCTCAAGCTCGCAGCGCTGACCGAGGCGGCGGCCGACGCGCTGCGTCGCCGCGGCGTCCCCGATCCCGAGGCCGGGCTGGCGGCCCACACCGCGGTGACGGTGTTCCACCTGGCGTTCGTCCGCTGGGTCGCCGACGACGACCCGCCTCCCCTCGGCGCGGTCATGGCGCAGACCGCGGACGCCCTCCGCGCCTTGACCTGA
PROTEIN sequence
Length: 197
MSVTVITRLGRMGRWEPDARGRMVVAAMELFAEHGFDRTTTGEIAERAGVTERTFFRHFADKREVLFDSTHAMDRLTVDAIATAPDGLGPFDVALVGMTAGAGLLDDRHDHAARRARIIESEPSLRERELLKLAALTEAAADALRRRGVPDPEAGLAAHTAVTVFHLAFVRWVADDDPPPLGAVMAQTADALRALT*