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cn_combo_scaffold_172_12

Organism: CN-SCN_Pseudonocardia_51x

partial RP 9 / 55 MC: 1 BSCG 8 / 51 MC: 1 ASCG 4 / 38
Location: comp(15249..16181)

Top 3 Functional Annotations

Value Algorithm Source
Nod factor export ATP-binding protein I {ECO:0000313|EMBL:CDZ89746.1}; EC=3.6.3.- {ECO:0000313|EMBL:CDZ89746.1};; TaxID=1830 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodoco similarity UNIPROT
DB: UniProtKB
  • Identity: 78.6
  • Coverage: 299.0
  • Bit_score: 480
  • Evalue 2.40e-132
ABC transporter n=1 Tax=Rhodococcus ruber RepID=UPI00034D28EA similarity UNIREF
DB: UNIREF100
  • Identity: 78.9
  • Coverage: 299.0
  • Bit_score: 481
  • Evalue 5.80e-133
putative multidrug ABC transporter ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 57.9
  • Coverage: 302.0
  • Bit_score: 325
  • Evalue 1.50e-86

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Taxonomy

Rhodococcus ruber → Rhodococcus → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 933
GTGAGCGCGATCGAGGTCGCCGACCTGCGTAAGGACTACGGAACGCTGCGTGCAGTGGACGGGATGTCGTTCACCGTCGAGACCGGCGAGGTCTTCGCGCTGCTCGGCCCCAACGGGGCCGGCAAGACGACTGCTGTGGAGATCCTGGAGGGCCATCGCCGACGGACCTCCGGATACGTCCACGTGCTCGGCTTCGACCCCCAAACCGGAGGACGAGACTACCGGGAGCGGATCGGGATCGTGTTGCAGGAAGCCGGGTTCGAGGAGGACTTCACCGTCCGCGAGCTGGTCCGCCTGTACCGCGGGCTGTACCCACGGCGCCTCGCGGCCGACGAGGTGATCGAGCGGGTCGGGCTGGTCGACAAGCGCGACGCGAAGGTCAAGACCCTGTCCGGCGGGCAGCGTCGCCGGCTCGACCTGGCCCTCGGGCTGGTGGGTGACCCCGAGCTGCTGTTCCTCGACGAGCCGACCACGGGCTTCGACCCGTCCGCCCGCCGGCGGGCCTGGGACCTGGTGGAGATGCTGCGAGGCCTGGGCAAGACGGTGCTGCTGACCACCCATTACATGGACGAGGCCCAGCACCTGGCCGACCGGGTCGGGGTCGTCGTGGCCGGCAGGCTCGTCGCCCTGGGCACCCCTGCCGAGATCGGTGGCGCCGCCCGGCAGGGCTCCGTGCTCACTTTCCGCCTGCCCCCGGGCACGAACCTGGGCGACCTGCCCGACCTCGGCGGGCCGCTGGCCACAGAGGGGCTGGAGTGGCAGCTCCGCACCCCCGAGCCGACGGCCGCACTGCACCGGCTCACCAGCTGGGCGACCACCCGGGGCATCGAGCTGCCCGCCCTGACCGTCACCCGCCCCTCTCTCGAGGACGTCTACCTCGACCTGGTCTCTGCGCACGGCGAGCATCCGATCTCCGAAGCCGCGGCGACATGA
PROTEIN sequence
Length: 311
VSAIEVADLRKDYGTLRAVDGMSFTVETGEVFALLGPNGAGKTTAVEILEGHRRRTSGYVHVLGFDPQTGGRDYRERIGIVLQEAGFEEDFTVRELVRLYRGLYPRRLAADEVIERVGLVDKRDAKVKTLSGGQRRRLDLALGLVGDPELLFLDEPTTGFDPSARRRAWDLVEMLRGLGKTVLLTTHYMDEAQHLADRVGVVVAGRLVALGTPAEIGGAARQGSVLTFRLPPGTNLGDLPDLGGPLATEGLEWQLRTPEPTAALHRLTSWATTRGIELPALTVTRPSLEDVYLDLVSAHGEHPISEAAAT*