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cn_combo_scaffold_292_14

Organism: CN-SCN_Pseudonocardia_51x

partial RP 9 / 55 MC: 1 BSCG 8 / 51 MC: 1 ASCG 4 / 38
Location: 12350..14092

Top 3 Functional Annotations

Value Algorithm Source
GAF modulated sigma54 specific transcriptional regulator, Fis family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CX15_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 78.2
  • Coverage: 574.0
  • Bit_score: 838
  • Evalue 3.50e-240
Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 78.2
  • Coverage: 574.0
  • Bit_score: 838
  • Evalue 9.90e-241
GAF modulated sigma54 specific transcriptional regulator, Fis family {ECO:0000313|EMBL:AEA24646.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardi similarity UNIPROT
DB: UniProtKB
  • Identity: 78.2
  • Coverage: 574.0
  • Bit_score: 838
  • Evalue 4.90e-240

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1743
ATGGGGGATGCCGTGGCCGACCGCAGGTTGCTCACGTCCGCGCGGGCGGGGCTCGTCGCCAGTTCACAGGCTCCGGTGCGGGGGGTGCCCGAGAACGTCGTCGCCTCGTGGCGGCGCAGCGTCGAGAGCGGGGTCGACCCCGGCGAGCTGGTCAGCGACTACGACCCCGCCCTCGACTTCGGCTCCCGCCTCGTCCACTGCGCGCGCCCCGTCATCGAGCAGCTCGCCGACCAGATCGCCGACATCCCCGTCTGCGTCGCGCTCACCGACGACCGCGCCCGGCTGCTCGTCCGCCGCGACACGACCCCCTGGATCGGGCGGGTCGCCGACGACCACTACTTCGCCGCCGGCTTCGACTACGCCGAGGGCCGGGTCGGGACGAACGGCGTCGGCACGGTCCTGGAGTCGGGGGAGTCGGTGCACGTCGTCGGCGCGCAGCACTTCGTCGAGCGGCTCCAGGCCTACGCGTGCGCCGGAGCCCCGGTCCGCGACCCGCTGACCGGCCGCATCGAGGGCGTCCTCGACATCAGCTGCGAGACCCGGTACTCCTCGCCCGTCCTGCACTCGCTCGTGCGGACGGCCGCGGCCCGTATCGAGGACAACCTGCTCCACGACCGCGACGAGGCCCAGCGCGTCCTGTTCGACGCCTACTGCCGCCTCGACGCCCGGTCCCGGCGCGCGGTGCTCGCCGTCGGGACGCGGGCGGTCGTCGCCAACGCCGCGATGCAGACGCTGCTCGACCCTCGTGACCTGCAGGCGCTGCAGGACCACATGCGGTTCGTGTCGCGACGCGGGGTGGTGCTGGACGAACGGGTCCCACTCCCGACCGGGGTTCAGGTCCGGCTGCGGGCCACCGCCGTCGAGGTGGGGTCCGACCTCGCGGGGCTGGTCGGGACGGTCGCCGTCGTGCGGGAGGCGGGCCCGGCCGTCGTGCCACGGCTGCCGGCGCCGCGCCGTGCCGCGCCGGAGCCACTGGGCGAGGGCCGGTGTGCGGCGTGGCGGGCCGCCTGGCGGGCCGCGGCCGAGGCGTTGCAGGCGCGGCGGGCGCTGCTCGTCGTCGGCGAACAGGGGAGTGGGCGGACGCGGTTGCTCACCGACCTCGACCGGCACCTCGGCGGCTCGGATGTCGTGGTCCAGGACGCGGCCGACGTCGCGGCCCGGCCGTCCGGGGTCGAGCCCGGGGCGTCGCTGCTCGTGCTCCGCGACGTCGACCGGGTGTCCGCCGACGCTCTCGGGATGCTCGACGAGGTGGTCGCCGCCGTCCTCGCCTCGGGTGGCCGGCTCGCCGCAACCGCGACGACCCCACCCGCCCACGACGGGCTGCTGGCCCGTTTTCGCAGCTCGGTGACGGTGCCGCCGCTGCGGGCGCGCGCCGTCGACCTACCGGGCCTCGTCGCGACGATCCTCGACGAGCTCGCCCCGCACCGGGAGATCGCCCTCGCACCGGAGGCGATGCGCACGCTGGCCCGGCACGGCTGGCCGGGCAACGTCGCCGAGCTGCGCGAGACCCTTGTCGCGGCGCTGGGCCGGCGGCCCGTCGGGACCGTCGAGGTGGCCGACCTGCCCGAGTCGTGCCAGAGCATGCCGCGCAGCGCGCTGCGCGTCGTCGACGAGGCCGAGCGCGACGCGATCGTGCACGCTCTCCGCGACGTCGGTGGCAACCGCGTCGCCGCGGCCACCGCACTCGGCCTCGCCCGGTCGACCCTCTACCGCAAGATCCGCCAATACGGCATCACCGGCTGA
PROTEIN sequence
Length: 581
MGDAVADRRLLTSARAGLVASSQAPVRGVPENVVASWRRSVESGVDPGELVSDYDPALDFGSRLVHCARPVIEQLADQIADIPVCVALTDDRARLLVRRDTTPWIGRVADDHYFAAGFDYAEGRVGTNGVGTVLESGESVHVVGAQHFVERLQAYACAGAPVRDPLTGRIEGVLDISCETRYSSPVLHSLVRTAAARIEDNLLHDRDEAQRVLFDAYCRLDARSRRAVLAVGTRAVVANAAMQTLLDPRDLQALQDHMRFVSRRGVVLDERVPLPTGVQVRLRATAVEVGSDLAGLVGTVAVVREAGPAVVPRLPAPRRAAPEPLGEGRCAAWRAAWRAAAEALQARRALLVVGEQGSGRTRLLTDLDRHLGGSDVVVQDAADVAARPSGVEPGASLLVLRDVDRVSADALGMLDEVVAAVLASGGRLAATATTPPAHDGLLARFRSSVTVPPLRARAVDLPGLVATILDELAPHREIALAPEAMRTLARHGWPGNVAELRETLVAALGRRPVGTVEVADLPESCQSMPRSALRVVDEAERDAIVHALRDVGGNRVAAATALGLARSTLYRKIRQYGITG*