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cn_combo_scaffold_2141_22

Organism: CN-SCN_Pseudonocardia_51x

partial RP 9 / 55 MC: 1 BSCG 8 / 51 MC: 1 ASCG 4 / 38
Location: comp(24237..25031)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, IclR family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CPQ4_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 86.2
  • Coverage: 268.0
  • Bit_score: 440
  • Evalue 1.30e-120
IclR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 85.8
  • Coverage: 268.0
  • Bit_score: 438
  • Evalue 1.00e-120
Transcriptional regulator, IclR family {ECO:0000313|EMBL:AEA25171.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia di similarity UNIPROT
DB: UniProtKB
  • Identity: 85.8
  • Coverage: 268.0
  • Bit_score: 438
  • Evalue 5.20e-120

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 795
GTGATCCAGTCCGTGGACCGCGCGGTGCGCATCCTCACCGCGCTGCAGGGTGCCCGCCGGATGGGCCTCGGCGAGCTCGCCGCCCAGCTCGAGCTCGCACCGTCGACGGTGCACGGAATCGTCCGCACCCTGCTCGACCACGGGATGATCGCCCAGGAGCGCGACTCCGGCCGCTACCGGCTCGGCCCCGCCACGCTGCGCCTGGGCAACGTCTACCTCGACACCCTGGAGCTGCGCTCGCGCTCGGTGCCGTGGGCCGAGGACCTGGCCGCCCGCACCGGGATGGCGGTACGCACCGCCGTGCTGCTGGCCGGTGTCGACCGTGACCTGCCCGAACGCGACGTCATCGTCGTCGCCCACGAGCCCCGCCCCCGCGGCGGGCGCCAGATGAACGAGGTCGGCATCGTCGTCCCCGCCCACGCGTGCGCGCTCGGCAAAGCGCTGCTGGCCTTCGACGACACGGCACTCCCGGAGACGGATACGTTGCGCAGCATGACCGGCGAGACCATCACCGACCCGGCGCGGCTGCGCGCCGAGCTGGCCGCCGTGCGTGCGGCCGGCATCGCCACCGAGTCCGAGGAGGCCGTCCTCGGCGAGTACGGCGTCGCCGCCCCGGTCGGCGACCACAGCGGGGCCGTGGCCGGCGCGATCGGGCTCGTGGTGCCGCAGACCGACTGGCCGCTCGACCCCGTCGCCGCCGACGCGCTGCGCGCCGCCGCCCGCAGCATCTCCCGCGAGCTCGGCGCCGCGTCGTGGCCGCCCGCGGTCACCGAGCGCCCGGCGGCGAGCGCATGA
PROTEIN sequence
Length: 265
VIQSVDRAVRILTALQGARRMGLGELAAQLELAPSTVHGIVRTLLDHGMIAQERDSGRYRLGPATLRLGNVYLDTLELRSRSVPWAEDLAARTGMAVRTAVLLAGVDRDLPERDVIVVAHEPRPRGGRQMNEVGIVVPAHACALGKALLAFDDTALPETDTLRSMTGETITDPARLRAELAAVRAAGIATESEEAVLGEYGVAAPVGDHSGAVAGAIGLVVPQTDWPLDPVAADALRAAARSISRELGAASWPPAVTERPAASA*