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cn_combo_scaffold_2257_23

Organism: CN-SCN_Pseudonocardia_51x

partial RP 9 / 55 MC: 1 BSCG 8 / 51 MC: 1 ASCG 4 / 38
Location: comp(20823..22538)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type transporter, periplasmic subunit n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CP92_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 87.1
  • Coverage: 536.0
  • Bit_score: 954
  • Evalue 4.30e-275
ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 87.1
  • Coverage: 536.0
  • Bit_score: 954
  • Evalue 1.20e-275
ABC-type transporter, periplasmic subunit {ECO:0000313|EMBL:AEA23651.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" sou similarity UNIPROT
DB: UniProtKB
  • Identity: 87.1
  • Coverage: 536.0
  • Bit_score: 954
  • Evalue 6.10e-275

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1716
GTGACGTGCGGGCCGCCCCCCGCGGCCCGCACGAGCAGTGATCCCCGCCCGGCAGTGACCACTGCCGGACTCGACGAGGAGTGGGTGGGCGAGATGCAGGTAGGAGCGGGACGACGGCAGGCACGCCTCGCCGCGGTGGTCGCCGCGGTCGTCGCGATGCTGCTCGTCGTGACGGGCTGCGGGTCGTCGACGGGAGGGTCCGCGGCGCAGACGGGGCCCATCAGCGCCGTCGACCCCTACGGCGGTGACCTCGCGAAGGAGGGCACGCCCAAGAAGGGCGGCACGCTGATCCTCGGCGCCGACCGCGAGGCCGTCAGCTTCGACCCGACCGTGCAGAACACCAACATGGCGCAGAACGCCGTCTACGACTCGCTGCTCAAGCTCTCCCCCGACGGCAAGATCGAGCCGTTCATCGCCACCGGCATGACCACGTCGGACAACGGGACGACGTGGACGATGACGCTCACCCCGAACGTCAAGTTCTCCGACGGAACCGACTATGACGCCAACGCCGTCATCATCAACACCCAGCGCCACATCGACAAGGCCACCTCGCCGGCGCACACCTACGCGGCGATGATCGCGAACATGCAGGCCGTCGACCCGCTGACGGTGAGGTTCACGCTGAGGTCGCCGCTCGCGTCGTTCCCGATCGTCTTCGCCCAGAGCGGGTTCAACGGCACCCTCGGCATGATCATCTCGCCGGCGGCCCTGCAGAAGTACGGCAAGGACATCGCCACCAACCCGGTCGGGGCCGGTCCGTTCACCCTCACCAGCTGGGTCCGCGACTCCACGATGACGCTGACGCGCAACCCGAACTACTGGCAGCAGGGCAAGCCGTACCTCGACGGGCTGGAGTTCCGGCCGCTGCCCGACACCGAGACCCGCACGTCGTCGACACAGAACGGCGACATCGACCTCGCGTTCGCCGCCTACAACCAGGAGCTCGTCCGCGGCCTGAACAACCCGAACCTGCAGGTCTACTACGGCCCCGGGAACTCCGGTGAGTACCTGTTCTTCAACTTCGCCAAGGCCCCGTTCGACGACCGCGGCATGCGCGAGGCCGCCATCCGCGCCATCGACATGAAGGCCCTCTCGGCCAGCCAGTACAACAACCGGCTGACCACCGCGAACAGCCTGTTCGACCAGTCGAGCCCGTACCACACCCAGCAGGCCGCCGACCTGTGGCCGACGTTCGACCAGGCCAAGGCCAAGGAGCTCGTCGACGCCTACCGGGCCAGGGGCGGGAACCCCGACTTCACCTTCAAGACGACGACGAGCCGCCAGCCCTTCGCCGAGTTCGTCCAGGCGCAGATGGCCGCCATCGGGATCAAGGTCGACGTCAAGACCTACGACCTGGCGCAGTACTCGTCGGCGGTCGTGCAGAGCGGGGACTTCCAGCTGAGCACCACCGTCGCGCCGCTCGACAACCCGTTCCCGGGAGCGCAGCGGCTCGTCGGCACCGGGGGCAGCGGCAACTTCGGGAAGTACTCCAACGCCGACGTCGACAAATGGTTGGCCGACGCCGCCGTCACCAGCGACGACGCCCAGCGCACCAAGGACTACCAGCAGATCGAGGACCAGGTGAACAAGGACCTCGCGGTGGTCTGGATCAGCCGGGCCTACCTGGCGACGATCACGAAGAAGGACGTCAAGGGCGTCGACCGCTACCTGTCCCGCGACATGTTCTACGGGACGACCTGGCTCGACCGCTGA
PROTEIN sequence
Length: 572
VTCGPPPAARTSSDPRPAVTTAGLDEEWVGEMQVGAGRRQARLAAVVAAVVAMLLVVTGCGSSTGGSAAQTGPISAVDPYGGDLAKEGTPKKGGTLILGADREAVSFDPTVQNTNMAQNAVYDSLLKLSPDGKIEPFIATGMTTSDNGTTWTMTLTPNVKFSDGTDYDANAVIINTQRHIDKATSPAHTYAAMIANMQAVDPLTVRFTLRSPLASFPIVFAQSGFNGTLGMIISPAALQKYGKDIATNPVGAGPFTLTSWVRDSTMTLTRNPNYWQQGKPYLDGLEFRPLPDTETRTSSTQNGDIDLAFAAYNQELVRGLNNPNLQVYYGPGNSGEYLFFNFAKAPFDDRGMREAAIRAIDMKALSASQYNNRLTTANSLFDQSSPYHTQQAADLWPTFDQAKAKELVDAYRARGGNPDFTFKTTTSRQPFAEFVQAQMAAIGIKVDVKTYDLAQYSSAVVQSGDFQLSTTVAPLDNPFPGAQRLVGTGGSGNFGKYSNADVDKWLADAAVTSDDAQRTKDYQQIEDQVNKDLAVVWISRAYLATITKKDVKGVDRYLSRDMFYGTTWLDR*