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cn_combo_scaffold_2906_5

Organism: CN-SCN_Pseudonocardia_51x

partial RP 9 / 55 MC: 1 BSCG 8 / 51 MC: 1 ASCG 4 / 38
Location: comp(1591..2118)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00036CC306 similarity UNIREF
DB: UNIREF100
  • Identity: 54.4
  • Coverage: 160.0
  • Bit_score: 172
  • Evalue 3.30e-40
transcriptional activator ligand binding domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 51.9
  • Coverage: 158.0
  • Bit_score: 165
  • Evalue 1.50e-38
Transcriptional activator ligand binding domain protein {ECO:0000313|EMBL:ADB34106.1}; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbe similarity UNIPROT
DB: UniProtKB
  • Identity: 51.9
  • Coverage: 158.0
  • Bit_score: 165
  • Evalue 7.30e-38

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Taxonomy

Kribbella flavida → Kribbella → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 528
ATGACTTCCGGCCGCCGCGGCGGTCGTCTGTGCATGGGCATCACCTACACCGAGGCTCCGCACGTCGCGGAGCGGCCGGCGCAGCCGTACGTCTTCACCACCCGCCAGGTCACCATGACCACGATCGGGGAGATCGCCGATCGCATCCCCGAGCTGTTCGGGTGGCTCGCGGGCCGGGGCATCGCGCCTGCGGGTGCACCGTTCCTGCGCTACCTGACCACCGACATGGACGGTACGTTGCTGGTCGAGGGCGGTGTCCCGGTCGCCGACCCCGTCGAGGGCGACGAGAGCGTCGACGCCGCTGTGCTGCCCGCGGGCCGCTACGCCGGACTGACCCACCGCGGCCATCCCGACGAGCTGGTCCAGGCCACCACGGAGCTCCAGGCCTGGGCCGACGAGCAGGGCCTACGTCTCGACCGGGCCGCGGACGGGCGCTGGGGCTGCCGGCTCGAGCTGTTCCACACCCACCCCGCGGAGGTCCCGATCGGGGCGTGGGTCACCGAGCTCGCGTTCAAGGTGACGGACTGA
PROTEIN sequence
Length: 176
MTSGRRGGRLCMGITYTEAPHVAERPAQPYVFTTRQVTMTTIGEIADRIPELFGWLAGRGIAPAGAPFLRYLTTDMDGTLLVEGGVPVADPVEGDESVDAAVLPAGRYAGLTHRGHPDELVQATTELQAWADEQGLRLDRAADGRWGCRLELFHTHPAEVPIGAWVTELAFKVTD*