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cn_combo_scaffold_2906_9

Organism: CN-SCN_Pseudonocardia_51x

partial RP 9 / 55 MC: 1 BSCG 8 / 51 MC: 1 ASCG 4 / 38
Location: comp(4980..5702)

Top 3 Functional Annotations

Value Algorithm Source
Putative sensor with HAMP domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTL9_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 90.8
  • Coverage: 239.0
  • Bit_score: 421
  • Evalue 7.30e-115
sensor with HAMP domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 90.4
  • Coverage: 239.0
  • Bit_score: 419
  • Evalue 6.00e-115
Putative sensor with HAMP domain protein {ECO:0000313|EMBL:AEA28522.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia similarity UNIPROT
DB: UniProtKB
  • Identity: 90.4
  • Coverage: 239.0
  • Bit_score: 419
  • Evalue 3.00e-114

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 723
GTGAGCGACCAGCGCACCGGGACCGTCCTCGTCGTCGACGACGACCCCACCAACCGGCTGCTCCTGCGACGCGGGCTGGAGCGTGAGGGGCTGAATGTCGAGACGGCCGGCGACGGCGTCGAGGCGCTCGACCGGCTCGCCTCCCCCGGGATCGACCTCGTACTGCTCGACCTGCTGATGCCCCGCCTCGACGGGCACGAGGTGCTGGCCCGGATGCGGGCCGACGCGCGGCTGCGCCACGTCCCGGTCATCGTCGTCTCCGGTGCCGACGAGACCGCCGAGGCGGTGCGGTGCATCGAGCTGGGCGCGGAGGACTTCCTGCCCAAGCCGTTCGATCCCGTGCTGCTGCGGGCGCGGATCGGGGCGGGCCTGTCACGCAAGTGGCTGCGCGACGTCGAGCAGGACTACCTGGAGCAGGTCGGGCAGGTCCTGCGCGCCGCCGGTGAGGTGGAGGCGGGAACGTTCACGCCGTCGACGCTCGACGGGGTCGCCGCCCGCGACGACGCCCTCGGCGGGCTGGCGCGGACCTTCCAGACGATGGCGCGCGAGGTCCGTGCCCGCGAGCAGCGCCTCGAACAGCAGGTGGGGGCGCTGCGCATCGAGATCGACCAGGCCCGGGCGGCGCGGCGCGTCGCCGAGATCACCGAGACCGACTACTTCGCCGACCTGCAGCGCAAGGCTGCGAGCCTGCGCGGCGGCGGCGCCGGGACGGAGAGTCCGTGA
PROTEIN sequence
Length: 241
VSDQRTGTVLVVDDDPTNRLLLRRGLEREGLNVETAGDGVEALDRLASPGIDLVLLDLLMPRLDGHEVLARMRADARLRHVPVIVVSGADETAEAVRCIELGAEDFLPKPFDPVLLRARIGAGLSRKWLRDVEQDYLEQVGQVLRAAGEVEAGTFTPSTLDGVAARDDALGGLARTFQTMAREVRAREQRLEQQVGALRIEIDQARAARRVAEITETDYFADLQRKAASLRGGGAGTESP*