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cn_combo_scaffold_2963_1

Organism: CN-SCN_Pseudonocardia_51x

partial RP 9 / 55 MC: 1 BSCG 8 / 51 MC: 1 ASCG 4 / 38
Location: comp(319..1050)

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, winged helix family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CM20_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 85.6
  • Coverage: 243.0
  • Bit_score: 404
  • Evalue 7.10e-110
winged helix family two component transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 85.6
  • Coverage: 243.0
  • Bit_score: 404
  • Evalue 2.00e-110
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:AEA22507.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" sou similarity UNIPROT
DB: UniProtKB
  • Identity: 85.6
  • Coverage: 243.0
  • Bit_score: 404
  • Evalue 1.00e-109

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 732
ATGCTCCCTGTTGCTCCCCCGGAGGGCGCGTCGGCATACGTCCCGAGCCCGCGGTCGTCCGATCGAAGACCGCTGATGTCGGACACCGTTCTGCTGGCGCTGCCCGCGACCGCGGCCACCGCGTCCGTCCTGCGCAGCTTGCGCTCCGACGGCCTCGACGTCGCCCCTGCCCACGACGGCATCGGCGTGCTCGACGCCGCCCGCGCCGGCGTCCCCGCCCTCGTCGTGCTCGACGTCGAGCTGCCCGGCCCCGACGTCTCGACCGTCGTCGGCGCCCTGCAGGCCGAGGTCTCGTCGGCGCCGATCGTCGGTGTGACGCCCCGTGAGCGACGGTCGTCGCTGCTCGGGCTGCTGCGCGCCGACCGTGACGACTACGTCCTGCGTCCCTTCGCCGTCGACGAGCTCGTCGCCCGCATCCGGCTGCGGCTGCGACAGGGCGGGCTCATCGAGGAGAAGGTCGTGCGCGTCGGCGACCTCGCCGTCGACCCCGATCTCGGCGAGGTACAGGTCGACGGCCGCCCCGTCGCGCTGTCGCCGACGGAGTTCTCGCTCCTCATGGCGCTCGTGTCCGAGGCGGGGGAGACGGTTTCGCACGACCGGATCGCGCAACGCGTCTGGACGGAACCGGCGTCGGCGAATCTCGTGCAGGTCTACATCTCCTACCTGAGGCGCAAGATCGGAGCCGAAAGAATTCGCACCGTGCGCGGCGCCGGATACGTACTCGAGGGCTGA
PROTEIN sequence
Length: 244
MLPVAPPEGASAYVPSPRSSDRRPLMSDTVLLALPATAATASVLRSLRSDGLDVAPAHDGIGVLDAARAGVPALVVLDVELPGPDVSTVVGALQAEVSSAPIVGVTPRERRSSLLGLLRADRDDYVLRPFAVDELVARIRLRLRQGGLIEEKVVRVGDLAVDPDLGEVQVDGRPVALSPTEFSLLMALVSEAGETVSHDRIAQRVWTEPASANLVQVYISYLRRKIGAERIRTVRGAGYVLEG*