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cn_combo_scaffold_2963_3

Organism: CN-SCN_Pseudonocardia_51x

partial RP 9 / 55 MC: 1 BSCG 8 / 51 MC: 1 ASCG 4 / 38
Location: comp(3631..5058)

Top 3 Functional Annotations

Value Algorithm Source
choline dehydrogenase (EC:1.1.99.1) similarity KEGG
DB: KEGG
  • Identity: 83.6
  • Coverage: 482.0
  • Bit_score: 802
  • Evalue 4.90e-230
Choline dehydrogenase {ECO:0000313|EMBL:AEA22505.1}; EC=1.1.99.1 {ECO:0000313|EMBL:AEA22505.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.; similarity UNIPROT
DB: UniProtKB
  • Identity: 83.6
  • Coverage: 482.0
  • Bit_score: 802
  • Evalue 2.50e-229
Choline dehydrogenase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CM18_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 83.6
  • Coverage: 482.0
  • Bit_score: 802
  • Evalue 1.80e-229

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1428
ATGCATCCTGCCCCCGTGGCCGATGAACGGTTCGACGTGGTCGTCGTCGGGGGTGGCAGTGCGGGCTGTGTGCTGGCCGCGCGGCTGGCGGAGAAGCGTTCCCGGCGGGTGCTGCTGCTTGAGGCCGGACCGTCGTCATCGACGAGAGACGTGGCCTCACTCGAAGCCTCCGTCCCCGGCCATCCGCTCAACTGGGGGTACGAGGCGGAGCTGGCGAGGGGCGTTCACGCCGTCCTGCCCCGCGGCCGCGTCCTCGGCGGGTCCAGCGCCATCAACGGCGCCTACTTCGTCCGCGCCACCCGCGACGACCTCGACGGCTGGGGCGTCCCCGGCCTCTCCTACGACGAGGCGCTGCCGTTCTACGTGCGCAGCGAATGCGACCTCGACGTCGGCTCGTCGACGGGCCACGGAGCCGACGGCCCGATACCGGTCCGCCGGCCCGCCGGAGCCCTGATCGCGCCGACCACCGAGCCGTTCCTCGCCGCCGCGGCAGCCCTCGGGTTCCCCGACGAACCCGACAAGAACGCCGGCGGCCCTCCCGGCGCGGGCCTGGTCCCGTCGAACGCCGTCGACGGCCTCCGGATCAGCGCTGCCGACGCCTACCTGCGCGAACGTCCGCCGAACCTGGTCGTCCGGACCGACACCCCGGTCGTCGGCATCGAGCTCGACCGCCTGCGCGCCGTCGGTGTCCGGACCGCGTCCGGCACGGTCGAAGCCGGGGAGGTCGTCCTCACCGCCGGTGCCCTCGCAACTCCCAGGCTGCTGATGGAGGCCGGCATCGGGCCGGGCGACGTCCTGCGGGAGGCCGGCATCCGCGTCCGCCACGACCTGCCCGTCGGCCAGGGCTTCTCCGACCACCCGGCCGTCTTCCTGCCCTTCCGCCCCCACGAGACCGCGGAGCCGCACCCGCACGCCGTGACCGCGCAGGTCGCGCTGCACCTCGACTCCGGCGCCGACCCCGCGGGTGACCTGGAGCTGCTCCTGTTCTCGAGACCGTTCACCCCCGGCGGGCCGCTGCACGTGATGTGCGCGCTGCAGCGCCCCGAGCGCAGCGGGCTGCTCACCCTCGACCGCACCGAACACCGCTACCTGCGCACCGAGGCCGACCGTCGACGGCTGCGCGCCGCCGTCCGGATCGCCGCCGACCTGCTCCGCGCCGGCCTCGGCACCCGCATCGAACCCGAGGGCTTCGTCCTGGGCAACGACGCCCGGCTCGACGGCTGGATCCGCGACCACCTGACCTCGTCGTCGCACCTGTCCGGCACCACCGCGATCGGCCCGGTGTGCGATCCCGAACTACGGGTCCGCGGCACGCAGGCGCTGCGCGTCGTCGACACCTCGGTGTTCCCCGCCGTCCCCCGAAGGGGGCCCGCAGCCAGCGCGATCATGCTGGGTGAACGCGCCGCAGCACTACGTTGGGACGCGTGA
PROTEIN sequence
Length: 476
MHPAPVADERFDVVVVGGGSAGCVLAARLAEKRSRRVLLLEAGPSSSTRDVASLEASVPGHPLNWGYEAELARGVHAVLPRGRVLGGSSAINGAYFVRATRDDLDGWGVPGLSYDEALPFYVRSECDLDVGSSTGHGADGPIPVRRPAGALIAPTTEPFLAAAAALGFPDEPDKNAGGPPGAGLVPSNAVDGLRISAADAYLRERPPNLVVRTDTPVVGIELDRLRAVGVRTASGTVEAGEVVLTAGALATPRLLMEAGIGPGDVLREAGIRVRHDLPVGQGFSDHPAVFLPFRPHETAEPHPHAVTAQVALHLDSGADPAGDLELLLFSRPFTPGGPLHVMCALQRPERSGLLTLDRTEHRYLRTEADRRRLRAAVRIAADLLRAGLGTRIEPEGFVLGNDARLDGWIRDHLTSSSHLSGTTAIGPVCDPELRVRGTQALRVVDTSVFPAVPRRGPAASAIMLGERAAALRWDA*