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cn_combo_scaffold_3014_19

Organism: CN-SCN_Pseudonocardia_51x

partial RP 9 / 55 MC: 1 BSCG 8 / 51 MC: 1 ASCG 4 / 38
Location: 17106..18731

Top 3 Functional Annotations

Value Algorithm Source
ABC-type transporter, periplasmic subunit n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D0J7_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 91.1
  • Coverage: 541.0
  • Bit_score: 1015
  • Evalue 2.60e-293
ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 90.9
  • Coverage: 541.0
  • Bit_score: 1013
  • Evalue 2.10e-293
ABC-type transporter, periplasmic subunit {ECO:0000313|EMBL:AEA26793.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" sou similarity UNIPROT
DB: UniProtKB
  • Identity: 90.9
  • Coverage: 541.0
  • Bit_score: 1013
  • Evalue 1.00e-292

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1626
GTGTCCAGTACCAGTCCACCCCGCCGCAGACGACGGCTGCTGTCCACCGCGGCCACGGCCCTGCTGACGGCCCTGACCCTGGTCCTCACGGCGTGCGGCGGCAGCGCCACGTCGGGTGGGGGCGCGGGAGCGAACACTCTGGTCATCGGCATGACGGCGAGCGACATCCCCGTCCTCGACACCGGGCTCGCGCAGGGTCAGGGCTACGAGGGGCTGCGGTTCGTCGCCAACCAGCTCTTCGACGGCCTCACGAAGTTCGACCTGACCGACGGTTCGAAGATCCCGACGATCGAGCCGGACCTCGCCGAGTCGTGGACGCCCAACGCCGACCTGACGAGCTGGACGTTCAAGCTCCGCCCCGGCGTCACCTTCCACGACGGCACCCCGTGGAATGCCGACGCGGCCATCTTCAACCTGGGCCGCTACGCGGACAAGTCGAGCCCGCAGTTCTACCAGGAGCTCAACGCCCAGGGCGGACTCTCGATCGCGGGGATCAAGAACTTCTCCAAGGTCGACGACATGACCATCGTCATCAACACCAACGGGCCGTGGTCGTACCTGCCCGTCGACCTCGCGACCGTGTACTTCGGCAGCCCCACCGCGATCCAGGCCGAGGGCAACCAGGGGTTCGCGGAGAAGCCCGTCGGGACGGGGCCGTTCAAGTTCGAGTCCCTCGAACGTGGCCAGCGCCTGGTCATGACCAGGAACGAGACCTACTGGAACGGCGCGCCGAAGCTCGACAAGGTCATCCTGCGCCCCATCCCGGACCCCACTGCCCGCACCGCGGCGCTGCGCTCCGGCGAGGTCAACTGGATCGAGGTCCCGCCGCCGGACGACGTACCCAGCCTCGAGAGCCAGGGCTTCCAGGTGCTGACGAACTCCTACAACCACATCTGGCCGTGGGTCTACAACATGCGCAAGGCCCCGTTCGACAACGTCAAGGTCCGTGAGGCGCTGAACTGGGCGATCAACCGGCAGTCGCTGGTGGACAACATCCTCAAGGGCACCGCCGAGCCCGCGCTCGGCTACACCCCGAAGGCCGACGCGTCCTTCCGCCCGGAGAGCGAGGTCTACGGCTACGATCCGGCCAAGGCCAAGCAGATGCTCGCCGAGGCCGGCTACCCCGACGGCTTCACGATGACGCTGTCCTACCCGACGAGCGGGTCCGGGAACATGGTCCCGACCCCGATGAACACCGCGCTGCAGGCCGACCTGGCCGCGATCGGGGTGAAGGTCGAGCTCAAGCCCATCGAGTGGGCGGCGATGCTGAACGACTTCTTCGTCGGCAACATCCCCGACGACGCCGACGCCATGAACATCTCGCTGTCGTTCCAGCAGGAAGGCTTCTGGACGAGCTGGTTCGGCTCGCAGTCCTCGGCCAACGCGGGCAAGTACTCCAGCCCCGAGGTCGACGCCCTGCTGGCCAAGGCGCGCACGGTGCTCGACGACAAGGAACGTTCCGACGTCTACGCCCAGGTCGCGCAGGTGCTGGGCAAGGACTCGCCGTGGCTGGTCGTCGTGAACGACAAGAACCCGCGCGTCCTGTCGTCGAACGTCCAGGGCTTCGTGCAGCCGCAGTCGTGGTTCGCCGACCTCACGACGATCTCGGTCTCCGACTCGGGCTGA
PROTEIN sequence
Length: 542
VSSTSPPRRRRRLLSTAATALLTALTLVLTACGGSATSGGGAGANTLVIGMTASDIPVLDTGLAQGQGYEGLRFVANQLFDGLTKFDLTDGSKIPTIEPDLAESWTPNADLTSWTFKLRPGVTFHDGTPWNADAAIFNLGRYADKSSPQFYQELNAQGGLSIAGIKNFSKVDDMTIVINTNGPWSYLPVDLATVYFGSPTAIQAEGNQGFAEKPVGTGPFKFESLERGQRLVMTRNETYWNGAPKLDKVILRPIPDPTARTAALRSGEVNWIEVPPPDDVPSLESQGFQVLTNSYNHIWPWVYNMRKAPFDNVKVREALNWAINRQSLVDNILKGTAEPALGYTPKADASFRPESEVYGYDPAKAKQMLAEAGYPDGFTMTLSYPTSGSGNMVPTPMNTALQADLAAIGVKVELKPIEWAAMLNDFFVGNIPDDADAMNISLSFQQEGFWTSWFGSQSSANAGKYSSPEVDALLAKARTVLDDKERSDVYAQVAQVLGKDSPWLVVVNDKNPRVLSSNVQGFVQPQSWFADLTTISVSDSG*