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cn_combo_scaffold_3187_11

Organism: CN-SCN_Pseudonocardia_51x

partial RP 9 / 55 MC: 1 BSCG 8 / 51 MC: 1 ASCG 4 / 38
Location: comp(7975..8415)

Top 3 Functional Annotations

Value Algorithm Source
Heat shock protein Hsp20 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CZD7_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 65.1
  • Coverage: 152.0
  • Bit_score: 181
  • Evalue 5.90e-43
heat shock protein Hsp20 similarity KEGG
DB: KEGG
  • Identity: 64.5
  • Coverage: 152.0
  • Bit_score: 180
  • Evalue 4.80e-43
Heat shock protein Hsp20 {ECO:0000313|EMBL:AEA25668.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (s similarity UNIPROT
DB: UniProtKB
  • Identity: 64.5
  • Coverage: 152.0
  • Bit_score: 180
  • Evalue 2.40e-42

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 441
GTGACCCTGATGCGATTCGACCCGTTCCGCGAGTTCGACCGGATCATGGAGCAGAACTTCTCACCTGCGCGGGCCCCGCGCAGCATGCCGATGACGGCGCTCCGCCGGGGCGACGTCTTCATCGTCGACCTCGACCTGCCCGGTGTGCACCGGGAGGACGTCGAGCTGACCGCCGAGCGCAACGTGGTGACCGTCCGCGCACGTCGGACGCCCGACCGCGGGGAGGGCGACGACGTCCTCATCGACGAGCGTCCGTACGGCGAGTTCTCGCGCCAGCTGTTCCTCGGCGACAACCTCGATCCTGCGGGGCTGTCCGCTGAGCTCACGGACGGCGTGCTGCGCCTGTCGATTCCGGTGCGGGAAGAGAGCAAAGCGCGCCGTATCGAGCTCGGTTCGTCGACCGAGGAGTCGCCTACGACGGTGCCGAGCTCGACCGGCTGA
PROTEIN sequence
Length: 147
VTLMRFDPFREFDRIMEQNFSPARAPRSMPMTALRRGDVFIVDLDLPGVHREDVELTAERNVVTVRARRTPDRGEGDDVLIDERPYGEFSRQLFLGDNLDPAGLSAELTDGVLRLSIPVREESKARRIELGSSTEESPTTVPSSTG*