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cn_combo_scaffold_3748_9

Organism: CN-SCN_Pseudonocardia_51x

partial RP 9 / 55 MC: 1 BSCG 8 / 51 MC: 1 ASCG 4 / 38
Location: 13502..14461

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI00035F8841 similarity UNIREF
DB: UNIREF100
  • Identity: 52.5
  • Coverage: 318.0
  • Bit_score: 333
  • Evalue 2.00e-88
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 39.4
  • Coverage: 297.0
  • Bit_score: 182
  • Evalue 2.10e-43
Helix-turn-helix, AraC domain protein {ECO:0000313|EMBL:AEA25688.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dio similarity UNIPROT
DB: UniProtKB
  • Identity: 39.4
  • Coverage: 297.0
  • Bit_score: 182
  • Evalue 1.10e-42

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 960
ATGACCACCCCTCGGTTCGCCGACGTCCACGTGACCGACATCGGTCGGGCGGCCACCCAGCTCCCGCAGACCGTGCACCTCGATCACGTCCCGACGACGCGGTTCGCGTTCCACACCCACCGGGTCACCCGTGGCCCGCTGATCGTCGAGGAGACCCGCTGCACCGACGGGGTCCACGTGCGGCTGCCCGATCGGCCGAGCTACCAGGTCGGGCTGCCGCTGCGCAGCTTGCTGCACGCCGACACCCGGGGCACGGAGCTGGACGTGGGTCCGGGCTGTGCCGCCATCTTCTCTCCGTGGCCGGAGACCACGGTGGCCACCGGCGACCGCTTCGACATGCTGCTGATCGATATCGGGTCGGTCACGTTGGAGGACATGCTGGAGGCGCTGCTCGGACGGGCCGTGCCCCGCCCTCTGCGGCTGTTCACCTCGATGACCGTGAGCTCCGGGGCGGGCCGGAAGTGGGCAAGCACGGTGCGGCTGGTTGCCAGTGCCACCACCGACACATCCTCGCTGCTCGACAACCCGATGAGCGCCGAGCCACTGCAGGACATGCTTCTGGTTCGGTTGCTGCTCGCCGCCGACCATCCGCACCGCGACGCGCTCGACGAGCGCGTACCCACCTGGGGTCCCCGGGCCGTACGCCGATGTGTCGACTACGTCGAGGCCCATCCGGAGCGCTCGCTGACGCTGACGAGTCTCGCCGCGGTCGCCGGGCTGAGCGTCCGAGCCCTCGAAGGTTGCTGGCTGCGGCACCGGGACGTGCGCCCCGGGCACGACGTCGGCCGGATCCGGCTCGCGCGGGCGCACCGCGACCTGCAGTTCTACCGGCCTGGAGAGGCCACGGTGACTACAGTCGCGAGATCGTGGGGATTCCGGCCACAGTCGTTCGTTGCGGCCTACGGCGCGCGTTTCGGCCGCTCCCCCGGGCAGACACTGCGTGGCCCCGCCTTCGCCTGA
PROTEIN sequence
Length: 320
MTTPRFADVHVTDIGRAATQLPQTVHLDHVPTTRFAFHTHRVTRGPLIVEETRCTDGVHVRLPDRPSYQVGLPLRSLLHADTRGTELDVGPGCAAIFSPWPETTVATGDRFDMLLIDIGSVTLEDMLEALLGRAVPRPLRLFTSMTVSSGAGRKWASTVRLVASATTDTSSLLDNPMSAEPLQDMLLVRLLLAADHPHRDALDERVPTWGPRAVRRCVDYVEAHPERSLTLTSLAAVAGLSVRALEGCWLRHRDVRPGHDVGRIRLARAHRDLQFYRPGEATVTTVARSWGFRPQSFVAAYGARFGRSPGQTLRGPAFA*