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cn_combo_scaffold_3968_4

Organism: CN-SCN_Pseudonocardia_51x

partial RP 9 / 55 MC: 1 BSCG 8 / 51 MC: 1 ASCG 4 / 38
Location: comp(1734..2222)

Top 3 Functional Annotations

Value Algorithm Source
Regulatory protein MarR n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CM01_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 73.5
  • Coverage: 162.0
  • Bit_score: 235
  • Evalue 3.80e-59
regulatory protein MarR similarity KEGG
DB: KEGG
  • Identity: 73.5
  • Coverage: 162.0
  • Bit_score: 235
  • Evalue 1.10e-59
Regulatory protein MarR {ECO:0000313|EMBL:AEA22488.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st similarity UNIPROT
DB: UniProtKB
  • Identity: 73.5
  • Coverage: 162.0
  • Bit_score: 235
  • Evalue 5.30e-59

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 489
ATGTCGGATGGCGGGACCACACAGTGGCTCGACGACGACGAGATGCGGTTCTGGCGGTCCTTCATCATCACGGCCACGCTGCTCGAGTCCCGTCTGAACCAGAACCTCAGCGAGTCGCACGGCATCACGCACAGCGACTACACGATCCTGGTGTTCCTCTCCGAGGCGCCGGGCCGGCGGCTGCGCATGAGCGTGCTGGCCGAGCTCATCGCCTCCTCCAAGTCCAGGCTGTCCCACCAGATCGCGCGGATGGAGAAGGCCGGCCTCGTCGCCCGCCAGGAGTGCGACTCCGACGGCCGCGGCATCCTCGCCGCCCTGCTCCCCGCGGGCATGGAGCTGCTGGAGCGGGCCGCCCCGACCCACGTCACCGCCGTCCGCGAGCTCGTGATCTCGCAGGTCACCAGAGTGGAGCAGAAGTCCTTCGCCGACGCGCTCGAGCGGATACACCGCACCCTGAGCGGCGGCGGCGAGGTCGCGGCCGCCAGCTAG
PROTEIN sequence
Length: 163
MSDGGTTQWLDDDEMRFWRSFIITATLLESRLNQNLSESHGITHSDYTILVFLSEAPGRRLRMSVLAELIASSKSRLSHQIARMEKAGLVARQECDSDGRGILAALLPAGMELLERAAPTHVTAVRELVISQVTRVEQKSFADALERIHRTLSGGGEVAAAS*