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cn_combo_scaffold_4157_1

Organism: CN-SCN_Pseudonocardia_51x

partial RP 9 / 55 MC: 1 BSCG 8 / 51 MC: 1 ASCG 4 / 38
Location: comp(1..450)

Top 3 Functional Annotations

Value Algorithm Source
Polysaccharide deacetylase family protein n=1 Tax=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) RepID=A7H2U6_CAMJD similarity UNIREF
DB: UNIREF100
  • Identity: 72.3
  • Coverage: 148.0
  • Bit_score: 228
  • Evalue 5.60e-57
Polysaccharide deacetylase {ECO:0000313|EMBL:KGL08026.1}; TaxID=1548149 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Helicobacter.;" source="Helicoba similarity UNIPROT
DB: UniProtKB
  • Identity: 72.3
  • Coverage: 148.0
  • Bit_score: 231
  • Evalue 9.30e-58
polysaccharide deacetylase family protein similarity KEGG
DB: KEGG
  • Identity: 72.3
  • Coverage: 148.0
  • Bit_score: 228
  • Evalue 1.60e-57

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Taxonomy

Helicobacter sp. MIT 05-5293 → Helicobacter → Campylobacterales → Epsilonproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 450
ATGTCGAAGGAGATCAAGGTCTGCGTCGGCGCCGACATCGACGCGGTGGCCGGATGGCTCGGTTCCTACGGGGGCGAGGACTCGCCCGCCGACATCCAGCGGGGCATGTTCGCCGGCGAGGTGGGGATCCCGCGCCTGCTGAACCTGTACCGCAAGTTCGACATCAAGACGACGTTCTTCTCCCCCGGGCACTCCATCGAGACGTTCCCGCATCGCATCGAGCAGATCGTCGAAGCCGGGCACGAGCTCGGCGCCCACGGCTACTCCCACGAGAACCCGATCCTGATGAGCCCGGAGCAGGAGGAGGACGTCCTCAACAAGTCGATCGAGCTGATCGAGCACTTCTCCGGTTCCCGCCCCCGCGGCTACATCGCCCCGTGGTGCGAGCTCTCCCCCGTCACCGCGGACCTGCTGCTCAAGAACGGCTTCCGCTACGACCACAGCCAGGCC
PROTEIN sequence
Length: 150
MSKEIKVCVGADIDAVAGWLGSYGGEDSPADIQRGMFAGEVGIPRLLNLYRKFDIKTTFFSPGHSIETFPHRIEQIVEAGHELGAHGYSHENPILMSPEQEEDVLNKSIELIEHFSGSRPRGYIAPWCELSPVTADLLLKNGFRYDHSQA