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cn_combo_scaffold_4157_17

Organism: CN-SCN_Pseudonocardia_51x

partial RP 9 / 55 MC: 1 BSCG 8 / 51 MC: 1 ASCG 4 / 38
Location: comp(13505..14080)

Top 3 Functional Annotations

Value Algorithm Source
Regulatory protein TetR n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CNW6_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 86.9
  • Coverage: 191.0
  • Bit_score: 327
  • Evalue 6.70e-87
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 86.9
  • Coverage: 191.0
  • Bit_score: 327
  • Evalue 1.90e-87
Regulatory protein TetR {ECO:0000313|EMBL:AEA22771.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st similarity UNIPROT
DB: UniProtKB
  • Identity: 86.9
  • Coverage: 191.0
  • Bit_score: 327
  • Evalue 9.30e-87

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 576
AGCCGACAGGCCCTCCTCGACGCCGCCCGCGTCGTGTTCGCCCGCGACGGGTTCACCAACGCCCGCATCACCGACATCTCCGACGAGGCCGGTGTCGCGCACGGCTCCTTCTACACGTACTTCAAGTCGAAGGACGAGATCTTCCTGGCGCTCATCGAGGAGCTCGAGGAGGACCTGCGGGTCAGCGGCGACGGCGAGCGCGCGGGCGCCACCGACGGCTCGGCCTACGCCCGCATCCTGCGCGCCAACACCGACTACCTCACCGCCTACCACGACAACCGCGGCATCATGGTCGTCTGGGAACAGGCCGCGACGCTCAACGACGAGGTCGCCGAGCTGCGCAGCCAGGCCAGCGAGCGGGCCGTCGCCCGGATCGTCCGCTCCATCGAGCACATGCAGACCGCAGGCGAGGTCACCGCCGCGATCGACGCCCGCTACGCCGCCACCGCGCTCACGGGCATGGTCAGCAACTTCGCCTACCGCTGGTGCCTGCGCGACGAGGACTTCGAGCTCGACAAGGCCGCGTCACAGCTGAGCCTGTTGTGGGCCAACGCGTTGGGAATCCCGACCCCCTGA
PROTEIN sequence
Length: 192
SRQALLDAARVVFARDGFTNARITDISDEAGVAHGSFYTYFKSKDEIFLALIEELEEDLRVSGDGERAGATDGSAYARILRANTDYLTAYHDNRGIMVVWEQAATLNDEVAELRSQASERAVARIVRSIEHMQTAGEVTAAIDARYAATALTGMVSNFAYRWCLRDEDFELDKAASQLSLLWANALGIPTP*