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cn_combo_scaffold_4220_7

Organism: CN-SCN_Pseudonocardia_51x

partial RP 9 / 55 MC: 1 BSCG 8 / 51 MC: 1 ASCG 4 / 38
Location: 4586..7228

Top 3 Functional Annotations

Value Algorithm Source
ATP-dependent transcriptional regulator, MalT-like, LuxR family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CW05_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 72.1
  • Coverage: 864.0
  • Bit_score: 1177
  • Evalue 0.0
LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 72.0
  • Coverage: 864.0
  • Bit_score: 1175
  • Evalue 0.0
ATP-dependent transcriptional regulator, MalT-like, LuxR family {ECO:0000313|EMBL:AEA26419.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.0
  • Coverage: 864.0
  • Bit_score: 1175
  • Evalue 0.0

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2643
GTGCGTGACGCGTATCCGTCCACCCTGTCCCCGCCGGCGTTGCCGCGAGATCTCGTGTCGCGGCCGGACCTGCGGGACGAGCTCGACAGCGGCGCCCGACGGGCCCTCACACTGGTCTGTGCGCCACCGGGTTTCGGCAAGACCGTCGCGGTCGCCGAATGGGTCCGGCGCGACTCCGGAACCCCGTTCGTCTGGCTGTCGCTGACCGCGGAGCACGACGACCCCCCGGCGCTGTGGGCCGCGGTGCTGGGCGCGCTGCGGGCAACGGGGATCGTCGCGCCGACCCGCCCGCGCCGCACCACGGCGCCCGGACCCGGGACGCCCGGCGGCCCGTCCCGGCTGCCCGACGACGTGGCCGCCACCTTCGAGGCCCTGCCCGGCCCGATCCGGCTGATCCTCGACGACGCCCACCACCTGCGCGGCCGGGAGACCGCCGAGCACCTGCGGCTGCTCGTGCGTGACCACGGACCGGCGGTCCAGCTGGTGCTGGTCAGCCGCCTCGACCCGCCGCTGTCACTGGCCCGGATGCGACTGTCGGGCGAGCTCTGCGAGCTGCGGACCGACCGGCTGCGGTTCACCGAACGAGAGACCGTGCAGATCCTGCGCCGCAACGGGCTGGACCCGACACGCAGGCAGGCGGCGACGCTGCACGAGCGCACCGGCGGCTGGGCCGCCGGACTGCGGCTGGCGGCGTGCTCGCTACGCCAGGTCCGCGACCCCGACCGCTTCCTGGCCGACTTCTCCGGCGACGACCACTCCGTCGCCGACTACCTCGTGGGGGAGGTGCTCGCCGGGATCGACGAGGATCGGCGCGAGGTGCTGCGCCGCGTCAGCATCGCCGACCCGGTCCCGGCGGCGCTCGCCGTCGAGCTCTGTGACCGCGAGGACGCCGCGGACGTCCTGGACGAGCTGGGTCGGGAGATCGGGCTGATCAGCGTCGCGCCCGACCGCGCCGACTTCCGCGTCCAGGAGCTGCTGCGTTCCTACTTGGAGGCCGACCTCCGCCGCCGGTCCGGCGGCGCGGTGGCGGCCCTGCACCGCCGGGCCGCCCTCTGGTGGGACAGCCACGGCAGGCCGGCCGAGGCCATGCACCACGTCAGCCGTGCCGGGGACCCGGCGTTCGCAGGCGGGATGCTCGTGCGCCGCGGCGCCCGGCTCGTCGCGATCGGCGACCGGGCCGTGCTGCGCGACGCGCTGCGGCTGTCGGGCACGACGACCGTGTCGCGGACGTGGGCCGCCGCGCTGTCGGCCCAGGACAACCTCGTGCGCGGCGACCGCGAGGCGGTGGCCGCCGACGTCCGGCGGGCCCGCCGCGAGGGCCACCCCGAAGCCGGCTCCGACCTGGCGGTGCTGCTGACCGCGACCGCGCGGCTCGCGGGCGTGGCCCGCTCCGTGCCCGCCGCGCCGGAGCCGCTGCCCGACGACCCGTCCCTCGCGGCCCTGGCCCTCGCCGGGCGCGGCGCTGTCGAGTGCCTCACCGGCACCTTCGACGAGGGGCGCTCCGACCTGGCCACCGCACTGGACACCGCCCGGCGCTGGCACCTGTCCCTGCTGGAGGCCCAGTGCCTGCTGCTGCTCAGCGAGGCGGCATGGGCGGTCGGCGACCTGCGCGAGGCCGCGGCCACGTCGGACGCGGCGCTGCGGGCCGTCGCCGACGGCGGCTGGGCCGGCTCCGGCCTCACCGTCAGCGCCACGGCCGTGGCCGCGCTGACCGCGGTCGAACGGGGCCGCTCCGACGCCGCGCTCACCATCCTCGACGCGGTCGAGACCTGCGAGTCCGCCGACCGCGACCCCGTGCTGCGCCTCGCCCTCGGGGTGTCACGCGGCGCGGCGCTGTTCGACACCGGGGAGCGCGCCGCGGGTCTGCTCGCACTGCAGCAGGCCCGCTCCGACGGCGCCGGGCACGAGGTCCCGCCCGCCCTCGCCACCGCGGCGGCGCTCATCGAGAACCACACCGCGCTCGAGATGGGCTACACCCGCGCGGCCGCCACGGCGGAGAGCCGCATCGACGGGCTGGTGGTCGCGGAGGGCGAACGGCTGCTGATGCGGGCCTGGGCCGAGTGCGCCGCCGGGAACCACCGTGACGCGCAGCACTGCATCGAGGAGCTGCTCCAACCGGGCGTGCCCCGGGCGCGGCCGTCCACGCTGGTGGAGGCGACGCTCGTCCTCGCGAACGTCGCCGTGCGCCGCGGCGACCGCCCCGCCGCCCGGTCCGCCGTGCGCGACGCGCTCGACCACGCCGCGACGATGGACCTGGTACGCCCGTTCGTCGTCACGTCGTCGTCGGTACGTGCGCTGCTCGTCGACGAGCTGATGGGGGAGGGCGTACGGGCCCGGTTCGCGGCCTGTGTGCTCGCGGTGCCCCGCGGCGGCGCCAAGCCCGTCGCGACGACGCTCACCGACCGTGAGCAGGACGTCCTCGCGCTGCTTCCGTCGCTGCTGAACCTCGACGAGATCGCAGCCGAGCTCGAGGTGTCGGTCAACACCGTCAAGAGCCACGTCCGGTCGATCTACGACAAGCTCGGCGCGTCCTCCCGCCGGAGGGCGGTACTGGCCGCGCACGAACGTGGGCTGCTGCGTCGCACACCGTCGCCGTTGCACGGCCATCGCGCCCGGGACACACGCCTCACCCGCCGCGCATGA
PROTEIN sequence
Length: 881
VRDAYPSTLSPPALPRDLVSRPDLRDELDSGARRALTLVCAPPGFGKTVAVAEWVRRDSGTPFVWLSLTAEHDDPPALWAAVLGALRATGIVAPTRPRRTTAPGPGTPGGPSRLPDDVAATFEALPGPIRLILDDAHHLRGRETAEHLRLLVRDHGPAVQLVLVSRLDPPLSLARMRLSGELCELRTDRLRFTERETVQILRRNGLDPTRRQAATLHERTGGWAAGLRLAACSLRQVRDPDRFLADFSGDDHSVADYLVGEVLAGIDEDRREVLRRVSIADPVPAALAVELCDREDAADVLDELGREIGLISVAPDRADFRVQELLRSYLEADLRRRSGGAVAALHRRAALWWDSHGRPAEAMHHVSRAGDPAFAGGMLVRRGARLVAIGDRAVLRDALRLSGTTTVSRTWAAALSAQDNLVRGDREAVAADVRRARREGHPEAGSDLAVLLTATARLAGVARSVPAAPEPLPDDPSLAALALAGRGAVECLTGTFDEGRSDLATALDTARRWHLSLLEAQCLLLLSEAAWAVGDLREAAATSDAALRAVADGGWAGSGLTVSATAVAALTAVERGRSDAALTILDAVETCESADRDPVLRLALGVSRGAALFDTGERAAGLLALQQARSDGAGHEVPPALATAAALIENHTALEMGYTRAAATAESRIDGLVVAEGERLLMRAWAECAAGNHRDAQHCIEELLQPGVPRARPSTLVEATLVLANVAVRRGDRPAARSAVRDALDHAATMDLVRPFVVTSSSVRALLVDELMGEGVRARFAACVLAVPRGGAKPVATTLTDREQDVLALLPSLLNLDEIAAELEVSVNTVKSHVRSIYDKLGASSRRRAVLAAHERGLLRRTPSPLHGHRARDTRLTRRA*