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cn_combo_scaffold_4510_7

Organism: CN-SCN_Pseudonocardia_51x

partial RP 9 / 55 MC: 1 BSCG 8 / 51 MC: 1 ASCG 4 / 38
Location: comp(4722..5690)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Rhodococcus imtechensis RKJ300 = JCM 13270 RepID=I0WZN9_9NOCA similarity UNIREF
DB: UNIREF100
  • Identity: 71.2
  • Coverage: 313.0
  • Bit_score: 431
  • Evalue 9.40e-118
LysR family transcriptional regulator {ECO:0000313|EMBL:EID81855.1}; TaxID=1165867 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus imtechensis RK similarity UNIPROT
DB: UniProtKB
  • Identity: 71.2
  • Coverage: 313.0
  • Bit_score: 431
  • Evalue 1.30e-117
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 44.9
  • Coverage: 305.0
  • Bit_score: 238
  • Evalue 1.90e-60

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Taxonomy

Rhodococcus imtechensis → Rhodococcus → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 969
ATGTCATGGATACGAGATATTGACCGCGCCGATATTGTCGGTGGCGTGATCGATCTCCGGACAGTCGACCTCAACCTGCTCGTCGACCTCGACGCGCTGCTCGCGACCCGCAGCGTCACCGAGGCGGCGCGCCGGCTGAACCTGAGCCAGTCGGCGATGAGCGGATCGCTGGCCCGTCTCCGCCGGCTGTTCGACGACCCCCTGATGGTCCGCACCGGCCGCGCGCTGACGCTGACGAGCCGTGCGGAGGCACTCATCGAGCCGGTCGCGGAGATCCTCCGGCTGACCGAGGTCGTGCTGGGCGACAAGGACGAGTTCGTACCGGCGACGGCAACCCGCTCGTTCTCGATCAGCGCATCGGACTACGCCACCGCGGTCGTCGTGGCCCCGTTGATCAGGACGCTGTCGGCCGAGGCGCCCGACGTGACGATCAACGTCCGCCCGCGCGCGGCCGACGTGCCGTCGCTGCTGCGCCAGGAACGGGTCGACCTGGTCATCGAGCCGCGCGAGACGATGGGCCCGTCACCGCTGCCGAGCACGTCCCTGTTCCGTGACCGCTGGCTCTGCATGCTCGACGCCTCCGTGCACCAGGGGACCGTGCTCGACCCGGAGCGCTACCTGGCGCTGCCCCACCTCGTGTACTCGATCGGCCAGGACCTCCAGCTCAACCTGGCCGACCGGCACCTCGCCGACCTGGGCGTGCAACGCCGGGTGGAGCTCACGATCGAGAGCTTCCTGATGGTTCCGCTCCTGATCCGTGGCACGACCCTGGTGAGCCTCGTGCTGGAGCGCTCCACGCAGTTGCTGCCGCTGACCGGTCTGCGGCTGGTCGACCCCCCCATTCCGGTGCCGGACATCAACGAGGCGATGTACTGGAACCCGCGCAACACCGACGACGCCGGCCATCGCTGGCTGCGGTCGCGGGTCGCGGCGACGGCGGCGGCGCTCGATGTCGGGCAGGCCGGCTGA
PROTEIN sequence
Length: 323
MSWIRDIDRADIVGGVIDLRTVDLNLLVDLDALLATRSVTEAARRLNLSQSAMSGSLARLRRLFDDPLMVRTGRALTLTSRAEALIEPVAEILRLTEVVLGDKDEFVPATATRSFSISASDYATAVVVAPLIRTLSAEAPDVTINVRPRAADVPSLLRQERVDLVIEPRETMGPSPLPSTSLFRDRWLCMLDASVHQGTVLDPERYLALPHLVYSIGQDLQLNLADRHLADLGVQRRVELTIESFLMVPLLIRGTTLVSLVLERSTQLLPLTGLRLVDPPIPVPDINEAMYWNPRNTDDAGHRWLRSRVAATAAALDVGQAG*