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cn_combo_scaffold_4545_7

Organism: CN-SCN_Pseudonocardia_51x

partial RP 9 / 55 MC: 1 BSCG 8 / 51 MC: 1 ASCG 4 / 38
Location: comp(3731..4480)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CRR5_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 79.8
  • Coverage: 243.0
  • Bit_score: 409
  • Evalue 3.00e-111
pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 80.4
  • Coverage: 240.0
  • Bit_score: 408
  • Evalue 1.90e-111
Pseudouridine synthase {ECO:0000313|EMBL:AEA27282.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (str similarity UNIPROT
DB: UniProtKB
  • Identity: 80.4
  • Coverage: 240.0
  • Bit_score: 408
  • Evalue 9.20e-111

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 750
GTGAGTCGCTGGTCCGAGCTGCGTGTCGAGACAGTCCTGTGGGAGGACGAGTCGTGCCTCGTCGTCGACAAGCCGTCGGGCCTGTCGGTCATGGGCGAGCGCCACGACACCGACCTGGTGACCATCGCCACGGACGGCGGTGAGGAGCTGCGTTGGGTCAACCGCATCGACAAGGTCACCTCGGGCGCGGTGCTGCTGGCCAAGACCAAGGAGGCGCACGGCGCGCTGACGCGGCAGTTCCAGCAGCGGACCGTCGCGAAGACGTACCTGGCGATCTGCCGTCCCGGCGGGTTCCCGGCGTCGGCGACCGTCGAGCTGCCGCTGATGACGGCGGGCAGCGGGAAGATCCGGGTGGCCGCCGACCGTGACCACATCCGGTTCGAGGAGGGTCGCTGGTTCGTCCGGCCCGAGGACGAGCACTCCCGCAAGAGCTTCCCGTCGCGCACGGAGTGCACGGCACTGTTCGACGACGGCGAGTCCGCGGTGGTGCGCGCCGACCCGGTGACGGGCCGCAGGCACCAGATCCGCGTGCACCTGGCGTGGGTGGGCCACGCGATCCTCGGCGATCCGCTGTTCATGCGGAAGACCGATCCGCCGCAGGCGCGGACCTACCTGCACTCGTTCCGCGTCGGGTTCCGGTCCCCCGCCGGAGAGGACGTCACCGTCGACGCCGTGCCGCCCGCGGACTTCTGGGCGCCCGTCCCCACCGCCGACGCCGCTGGACTTGTAGACCTCGCGCGCAGGCCGTAG
PROTEIN sequence
Length: 250
VSRWSELRVETVLWEDESCLVVDKPSGLSVMGERHDTDLVTIATDGGEELRWVNRIDKVTSGAVLLAKTKEAHGALTRQFQQRTVAKTYLAICRPGGFPASATVELPLMTAGSGKIRVAADRDHIRFEEGRWFVRPEDEHSRKSFPSRTECTALFDDGESAVVRADPVTGRRHQIRVHLAWVGHAILGDPLFMRKTDPPQARTYLHSFRVGFRSPAGEDVTVDAVPPADFWAPVPTADAAGLVDLARRP*