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cn_combo_scaffold_4545_9

Organism: CN-SCN_Pseudonocardia_51x

partial RP 9 / 55 MC: 1 BSCG 8 / 51 MC: 1 ASCG 4 / 38
Location: 6000..6614

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE38E similarity UNIREF
DB: UNIREF100
  • Identity: 87.9
  • Coverage: 174.0
  • Bit_score: 303
  • Evalue 1.40e-79
regulatory protein TetR similarity KEGG
DB: KEGG
  • Identity: 72.6
  • Coverage: 190.0
  • Bit_score: 279
  • Evalue 8.20e-73
Regulatory protein TetR {ECO:0000313|EMBL:ADL46069.1}; TaxID=644283 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strai similarity UNIPROT
DB: UniProtKB
  • Identity: 72.6
  • Coverage: 190.0
  • Bit_score: 279
  • Evalue 4.10e-72

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Taxonomy

Micromonospora aurantiaca → Micromonospora → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 615
GTGACAGCAGGGCGGCGGAGGGGCGTCGAGCTGGAACGGGCGATCCTGCGCGCGGCCGCCGAGGAACTCGTTGCGTCCGGGTACGCCGGCATGACGATGGACAAGGTCGCCCGGCGGGCCGGCACGAACAAGAACGCGATCTACCGGCGCTGGCCGCAGCGTGCCGCACTCGGTGTCGCCGCCTACAAGTACGTGGCGGACGCCCGCACCCCCACGGTGGACACGGGCACTCTTCGCCGCGATGCCCTGGAACTGCTGCGGCAGGCCAACGCGAGCTGGTCCTCACCCCATGGGGCGGTTTTGCGTGATCTCCTGGCGGCTGCTGCCGACGAGCCTGCTCTGCTGGATCTGCTGCGCGAGCAGGCGGGAGGCGGTGCGCTGAATGCCGCTTGGTTCGCACTTCTGAGTCGGGCGGTGGCGCGCGGCGAGGCCCCTCCGGAGGCGGTGCAGCCGCGGGTGGCGGCCCTGCCGATGACGTTGTTGCGTGGTGAGTACGCCCTGCGAGGTGTTCCGGCCCTGCCGGACGAGGTTCTGGTGGAGATCATCGACGAGATCTTCCTGCCGCTCATCCGTGGCCGGGGCCTGGCGTGCCCTGTGCCGCTATCCGCTGGCTGA
PROTEIN sequence
Length: 205
VTAGRRRGVELERAILRAAAEELVASGYAGMTMDKVARRAGTNKNAIYRRWPQRAALGVAAYKYVADARTPTVDTGTLRRDALELLRQANASWSSPHGAVLRDLLAAAADEPALLDLLREQAGGGALNAAWFALLSRAVARGEAPPEAVQPRVAALPMTLLRGEYALRGVPALPDEVLVEIIDEIFLPLIRGRGLACPVPLSAG*