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cn_combo_scaffold_4640_5

Organism: CN-SCN_Pseudonocardia_51x

partial RP 9 / 55 MC: 1 BSCG 8 / 51 MC: 1 ASCG 4 / 38
Location: comp(5556..6488)

Top 3 Functional Annotations

Value Algorithm Source
squalene synthase HpnD (EC:2.5.1.32) similarity KEGG
DB: KEGG
  • Identity: 85.7
  • Coverage: 308.0
  • Bit_score: 523
  • Evalue 4.90e-146
Squalene synthase HpnD {ECO:0000313|EMBL:AEA25847.1}; EC=2.5.1.32 {ECO:0000313|EMBL:AEA25847.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia. similarity UNIPROT
DB: UniProtKB
  • Identity: 85.7
  • Coverage: 308.0
  • Bit_score: 523
  • Evalue 2.50e-145
Squalene synthase HpnD n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D0Z5_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 85.7
  • Coverage: 308.0
  • Bit_score: 523
  • Evalue 1.80e-145

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 933
ATGAGCCGCAGCCCGTCCACCCCCGTCGAGCGCGCGTACGCGGCGAGCGAGGCGATCACGCGGGACCAGGCGCGGAACTTCTACTACGGTATCCGGCTCCTCCCGCCCCGTAAGCGTGCGGCGCTGTCGGCGGTGTACGCGCTGGCACGGCGCATCGACGACATCGGCGACGGCGACGCGGGAGGCGACCCGTCGACCGCCGGAAAGCTCGCCGCGCTGGAGCAGGTCCGCATGTCGGTGCGGCAGGCCCGCGAGGCCGAGCCCGACCCGCGCGACCCGGTGATGGTCGCGGTCACCGACGCCGCCCGGCACTACCCGATCCCGCTCGGCGCGTTCGACGAGCTCGTCGACGGCGTCGAGGCCGACGTGCGGATGGACGACGAGCCCGGCGCGAGCGCCCCCTACGCCACCTTCGACGACATGGCCGGCTACTGCCGCCAGGTCGCGGGCTCGGTGGGGCGGCTGTGCCTGGGCATCTTCGGGTCCCGCCCGTACCCGGAGGCCCCCGCCTACGCCGACGCCCTGGGCATCGCCCTGCAGCAGACGAACATCCTGCGCGACATCCGCGAGGACCTGGGCAACGGCCGCGTCTACCTGCCGACCGACGAGCTCGCCCGGTTCGGCGTCGATCTGCGTCTCGACGACCGCGGCAACCTTCCCGACCCGGACGGCGCGCTGGCCGAGCTGATCCGCTTCTCGGCCGCGCGGGCCCGGCAGTGGTACGCCGACGGGCTGCGGCTGGTCCCGCTGCTCGACCGGCGCAGCGCCGCCTGCGCCACCGCGATGGCCGGCATCTACCGCCAGCTGCTCGACGACATCGCCGCCGACCCGCCGTCGGTCTACCACCAGCGCCGGTCGCTGTCGGGCCGGCAGAAGGTCGGGGTCGCGGTGAAGGCGCTGGCCGGGCGGGCGCCGGGAGGTGTGCGGGTGTGA
PROTEIN sequence
Length: 311
MSRSPSTPVERAYAASEAITRDQARNFYYGIRLLPPRKRAALSAVYALARRIDDIGDGDAGGDPSTAGKLAALEQVRMSVRQAREAEPDPRDPVMVAVTDAARHYPIPLGAFDELVDGVEADVRMDDEPGASAPYATFDDMAGYCRQVAGSVGRLCLGIFGSRPYPEAPAYADALGIALQQTNILRDIREDLGNGRVYLPTDELARFGVDLRLDDRGNLPDPDGALAELIRFSAARARQWYADGLRLVPLLDRRSAACATAMAGIYRQLLDDIAADPPSVYHQRRSLSGRQKVGVAVKALAGRAPGGVRV*