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cn_combo_scaffold_4640_6

Organism: CN-SCN_Pseudonocardia_51x

partial RP 9 / 55 MC: 1 BSCG 8 / 51 MC: 1 ASCG 4 / 38
Location: comp(6485..7447)

Top 3 Functional Annotations

Value Algorithm Source
Squalene synthase HpnC n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D0Z4_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 70.6
  • Coverage: 327.0
  • Bit_score: 446
  • Evalue 2.80e-122
squalene synthase HpnC similarity KEGG
DB: KEGG
  • Identity: 70.3
  • Coverage: 327.0
  • Bit_score: 444
  • Evalue 2.30e-122
Squalene synthase HpnC {ECO:0000313|EMBL:AEA25846.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (str similarity UNIPROT
DB: UniProtKB
  • Identity: 70.3
  • Coverage: 327.0
  • Bit_score: 444
  • Evalue 1.10e-121

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 963
GTGGGAGATCGGCGGACGGGGGCGGCGCCGGTGCCCGCGGCGGAGCCGACGGAGGCCCGTCTGCGGGACGCGGAGCGGTCCGAGAACTTCCCGGTGGCACTGCGGGTGCTGCCGGCGGCGACCCGCGCCCACCTGCGGGCGGTCTACGACGTCGTCCGCGTCATCGACGACATCGGTGACGGCGACTCCGATGGGGCGCAACAGGTTCTGTGTCCCGTCACCCCGGAGGAGGCCGCCGAACGGACCGCGCGGCTGCACGGGCTGTGCACCGACCTGCGGCGGGTCTGGGATGTCGACGGCGCCGGTCCGGAGGCGCCCGTCCTGCGCCGGCTGGTGCCGACGGCGCGGGCGTGCGGGCTGACCAGGGAACCGTTCGAACGGCTCGTCGCGGCCAACCTCGCCGACCAGTACGTCACGCGGTACCGCACGTGGGACGAGCTGCTCGGCTACTGCGTGCTCTCGGCCGACCCGATCGGCCGGATGGTCCTCTCCGTGTTCGGTGTGGACGCCCCACCCGGGTCCGACCTGCAGCGCTGGTCGGACCGGATCTGCACCGCCCTGCAGATCCTCGAGCACTGCCAGGACGTCGCCGAGGACCGGGCCCGCGGCCGGGTGTACCTGCCCACCGACGACCTGGCCGCGTTCGGTGTCGAGGAGAGTGAACTCGACGCTCCGCACGCCTCTCCCGCGCTGCGCGCGCTGCTCGCCGAGGTCACCGGCCGGGCATGCGCGCTGCTCGACGAGGGCGCACCGTTGATCGGCCGGCTGCACGGCTGGGCCCGGATCGCAGTGGCCGGGTACGCCGCGGGCGGCCGGGCCGCGGCGGATGCGTTGCGCCGCAGCGGGTTCGACGTCCTCGCCGGAGCGCCGGAGGCGAAACGCCGCGACGTCGTCCGGCATCTGGTCCGCGACCTGACCCGTCCGTCACGAGAGCACGAGTCCCGGAAGCAGGGCACCGTATGA
PROTEIN sequence
Length: 321
VGDRRTGAAPVPAAEPTEARLRDAERSENFPVALRVLPAATRAHLRAVYDVVRVIDDIGDGDSDGAQQVLCPVTPEEAAERTARLHGLCTDLRRVWDVDGAGPEAPVLRRLVPTARACGLTREPFERLVAANLADQYVTRYRTWDELLGYCVLSADPIGRMVLSVFGVDAPPGSDLQRWSDRICTALQILEHCQDVAEDRARGRVYLPTDDLAAFGVEESELDAPHASPALRALLAEVTGRACALLDEGAPLIGRLHGWARIAVAGYAAGGRAAADALRRSGFDVLAGAPEAKRRDVVRHLVRDLTRPSREHESRKQGTV*