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cn_combo_scaffold_4894_4

Organism: CN-SCN_Pseudonocardia_51x

partial RP 9 / 55 MC: 1 BSCG 8 / 51 MC: 1 ASCG 4 / 38
Location: comp(1988..3091)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type transporter, integral membrane subunit n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CPJ6_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 84.7
  • Coverage: 367.0
  • Bit_score: 607
  • Evalue 6.40e-171
ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 84.5
  • Coverage: 367.0
  • Bit_score: 606
  • Evalue 5.20e-171
  • rbh
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AEA25113.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudono similarity UNIPROT
DB: UniProtKB
  • Identity: 84.5
  • Coverage: 367.0
  • Bit_score: 606
  • Evalue 2.60e-170

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1104
GTGACCGCCACCGTCGAGGAGCCGGGCAGGCGCGTCCCGGGTCTCGTCCCGGGGCGCGACCCGTTGCGGGTCGGCAGATTCTCCGGGGTCTGGCGGCCGCGGACGATCGTCGTGATGGTCGCGACGGCCGCGGTCCTGGTCGTCGGGGCGGCGCTGAACATCGGCCGGGGCGAGTTCCCGATCGGCGTGGGCGACGTGCTGGCGACACTCTTCGGTGGCGGCGGCCCCGCGGAGCAGTTCATCGTGCTCGACCTGCGGCTGCCGCGGACGCTCACCGGCGCGCTCGTCGGCGGGGCGCTGGGCGTGTCGGGCGCGATCCTGCAGGCGTTGGCGCGCAACCCTCTCGCGGCACCCGACATCATCGGCATCACGATGGGCGCGAGCGCCGCCGCCGTCGGCGTGATCGTCCTCGGCAGCGGCGCCGGTGCGTTCGCCGTCATCGCGAGCTCGGTGGGGCTGCCGGTCGCGGCGCTGCTCGGCGGTCTGGTCACCGCGACGCTGATCTATCTGCTGGCCTGGCGCAAGGGCGTACAGGGCTTCCGGCTCGTCCTCGTCGGCATCGGGATGAACGCGATCCTGTACGCGCTGGTCAACTGGCTGCTGATCGCCGCGCAGGTCTACGAGGCCGCCCGCGCGCAGGTGTGGCTCAACGGCAGCCTCAACGCCCGCGGCTGGGAGCACGTCGTCCCGGTCGGGATCGCGCTGGCGATCCTCGTGCCCGTCGCGCTCGTGCTTGCTCACCTGCTCGGTGCGCTGCAGTACAACGACGACACCGCCCGCTCGCTGGGCGTGCGCGTCGACGGAGCGCGGACCGCCCTGCTCGCCGTGGCCGTCGGCCTCGCCGCGATCGCGACGGCGTCGGCGGGCCCGATCGCGTTCGTCGCGCTCGTATCGCCGCAGATCGCGCAACGGCTCGTCGGATCGCCGCGACCGCCGATCGGGGCCTCGCTGCTCATCGGGGCGACGCTCGTCGTCCTGTCGGACCTGTTGGCGCGCACGGCGTTCGGCAGTGCGGAGCTGCCGGTCGGCGTCGTCACCGCCGTCCTGGGTGCCCCGTACCTGCTCTACCTGCTCGTCCGTCACGGCCGGGAGGCCCGAGTATGA
PROTEIN sequence
Length: 368
VTATVEEPGRRVPGLVPGRDPLRVGRFSGVWRPRTIVVMVATAAVLVVGAALNIGRGEFPIGVGDVLATLFGGGGPAEQFIVLDLRLPRTLTGALVGGALGVSGAILQALARNPLAAPDIIGITMGASAAAVGVIVLGSGAGAFAVIASSVGLPVAALLGGLVTATLIYLLAWRKGVQGFRLVLVGIGMNAILYALVNWLLIAAQVYEAARAQVWLNGSLNARGWEHVVPVGIALAILVPVALVLAHLLGALQYNDDTARSLGVRVDGARTALLAVAVGLAAIATASAGPIAFVALVSPQIAQRLVGSPRPPIGASLLIGATLVVLSDLLARTAFGSAELPVGVVTAVLGAPYLLYLLVRHGREARV*