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cn_combo_scaffold_5311_4

Organism: CN-SCN_Pseudonocardia_51x

partial RP 9 / 55 MC: 1 BSCG 8 / 51 MC: 1 ASCG 4 / 38
Location: comp(3025..3687)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Kribbella catacumbae RepID=UPI00035C9751 similarity UNIREF
DB: UNIREF100
  • Identity: 67.0
  • Coverage: 209.0
  • Bit_score: 267
  • Evalue 9.40e-69
LuxR family transcriptional regulator {ECO:0000313|EMBL:KJK44115.1}; TaxID=68170 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aeroco similarity UNIPROT
DB: UniProtKB
  • Identity: 64.6
  • Coverage: 209.0
  • Bit_score: 268
  • Evalue 7.70e-69
two-component system response regulator similarity KEGG
DB: KEGG
  • Identity: 62.6
  • Coverage: 211.0
  • Bit_score: 256
  • Evalue 8.00e-66

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Taxonomy

Lechevalieria aerocolonigenes → Lechevalieria → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 663
ATGTCTGAACCGGTGCCGCCGTTGCGAGTCGTTCTCGCCGACGACCATCCCGTCGTCCGCGACGGTCTGGCCGCACTGCTGGGCTCGGTGCCGGGCATCGACGTCGTCGAGACCGTCTCGACCGGCCGCGAGGCCGTGCGGGCCGCGGTGACGCGGCGCCCCGACGTCGTGGTGCTCGACATCCAGATGCCCGATCTCGACGGGGTCGGCGCCGCGGCCCGGATCGCGCGGGACGCACCCGACGTCGCCGTCCTGATGCTCACGATGTTCGACGACGACGACTCCGTCTTCGCCGCGATGCGTGCGGGCGCGGGCGGCTACGTGCTCAAGGGCGCGTCGCAGGAGGAGATCGTGCGGGCGATCCACGCCGTCGCGGCGGGCGAGGCCATCTTCGGGCCGTCGGTCGCGCGGCGGGTGCTCGCGCAGCTGAGCGGCGGGGCAGCGGCAGCCGACCCGTTCCCGGACCTCACGCCCCGCGAGCGCGAGGTGCTGACGCTCATGGCCGAAGGTCTGCCGACGGCGACGATCGGCGCGCGGCTGGGGCTCGCGGCGAAGACGGTCACGAACCACGCGTCGGCGGTGTTCGCGAAGCTGCAGGTCGGGGGGCGGGCCGAGGCGGTGGAGCGGGCCCGACGGGCAGGCCTCGGAGGTGGCTCGGGTTGA
PROTEIN sequence
Length: 221
MSEPVPPLRVVLADDHPVVRDGLAALLGSVPGIDVVETVSTGREAVRAAVTRRPDVVVLDIQMPDLDGVGAAARIARDAPDVAVLMLTMFDDDDSVFAAMRAGAGGYVLKGASQEEIVRAIHAVAAGEAIFGPSVARRVLAQLSGGAAAADPFPDLTPREREVLTLMAEGLPTATIGARLGLAAKTVTNHASAVFAKLQVGGRAEAVERARRAGLGGGSG*