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cn_combo_scaffold_5448_9

Organism: CN-SCN_Pseudonocardia_51x

partial RP 9 / 55 MC: 1 BSCG 8 / 51 MC: 1 ASCG 4 / 38
Location: comp(9431..10252)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A (EC:5.4.99.12) similarity KEGG
DB: KEGG
  • Identity: 85.2
  • Coverage: 264.0
  • Bit_score: 457
  • Evalue 2.20e-126
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridy similarity UNIPROT
DB: UniProtKB
  • Identity: 85.2
  • Coverage: 264.0
  • Bit_score: 457
  • Evalue 1.10e-125
tRNA pseudouridine synthase A n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWB1_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 85.2
  • Coverage: 264.0
  • Bit_score: 457
  • Evalue 8.00e-126

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 822
GTGCCCACTGTGCCTGCTCCCACGAACAGGTACCGGCTCGACATCTCCTACGACGGCACGGACTTCTCCGGCTGGGCGCCGCAGCCGTCGCGGCGCACCGTGTACGGCGAGATCTCCGATGCGCTGCACCGTCTTCTGCGCGAGCCGGTCTCGCTGACGGTCGCGGGTCGTACCGACGCCGGGGTGCACGCGAGCGGGCAGGTGGCCCACGTCGACCTGGCCGTCTCCCTGGCGATCGAGCCGGACCGGCTCGTCCGCCGGCTCGCCCGGCTGCTGCCCCCCGACGTGCGGGTGCGCGACGTGCGCGTCGTGCCGCCCGACTTCGACGCCCGCTTCTCCGCGCTGCGCCGCCACTACGTCTACCGCGTCACGACGTCGCCGTGGGGCGCCGACCCGTTGCGCGCCAGGGACACCCTCGCCTGGCCGCACCCCGTCGACCTCGACGCCGTCGCCGCCGCCTCCGCCGGGCTGGTCGGCGAGCACGATTTCGCGGCCTTCTGCAAACGCCGCGAGGGCGCCACGACCATCCGCGAGCTGCTGCGCTTCGACTGGTCGCGCGACGCCGACGGCGTCCTGCACGCCGAGCTGAGCGCCGACGCGTTCTGCCACAGCATGGTGCGCAGCCTGATCGGCGCGATGCTCGACGTCGGCCGGGGCCGTCGTCCCGTCGACTGGCCGGCGAGCCTTCTGGACCGCACCGAACGCGTCTCCGACGTCGCCGTCGCTCCCGCGCACGGGCTGACGCTGGTGCGCGTCGACTACCCGGCGGACGACGAGCTCGCCGCCCGCGCGGCGGTCACGCGCAACGTCCGCACGCGCTGA
PROTEIN sequence
Length: 274
VPTVPAPTNRYRLDISYDGTDFSGWAPQPSRRTVYGEISDALHRLLREPVSLTVAGRTDAGVHASGQVAHVDLAVSLAIEPDRLVRRLARLLPPDVRVRDVRVVPPDFDARFSALRRHYVYRVTTSPWGADPLRARDTLAWPHPVDLDAVAAASAGLVGEHDFAAFCKRREGATTIRELLRFDWSRDADGVLHAELSADAFCHSMVRSLIGAMLDVGRGRRPVDWPASLLDRTERVSDVAVAPAHGLTLVRVDYPADDELAARAAVTRNVRTR*