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cn_combo_scaffold_5973_6

Organism: CN-SCN_Pseudonocardia_51x

partial RP 9 / 55 MC: 1 BSCG 8 / 51 MC: 1 ASCG 4 / 38
Location: 3929..4558

Top 3 Functional Annotations

Value Algorithm Source
Regulatory protein TetR n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVB5_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 90.7
  • Coverage: 205.0
  • Bit_score: 365
  • Evalue 3.20e-98
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 90.7
  • Coverage: 205.0
  • Bit_score: 365
  • Evalue 8.90e-99
Regulatory protein TetR {ECO:0000313|EMBL:AEA23179.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st similarity UNIPROT
DB: UniProtKB
  • Identity: 90.7
  • Coverage: 205.0
  • Bit_score: 365
  • Evalue 4.40e-98

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 630
ATGGACGTGGGACGGGACGTGCGCGAGCCGCCGCGGACGGCGCGGGGGCTGCGCACCCGGGCGACGCTGGTGGCAGCGGCGCGGCGGGTGTTCGAACGGAAGGGCTACCTCGACGCGAAGCTCACCGACATCACGCGCGAGGCGCAGTGCGCCGTCGGGTCCTTCTACACGTACTTCACGAACAAGGAGGAGATCTTCGCCGCGGTCCTGGAGGAGGCCAAGGAGGAGATGCTCCACCCGAACGTCCGGGAGATGACGGGTACCGACGACCCGGTCGCCGTCATCCGGGCTGCGAACCGCGCTTACCTGGAGTCCTACGCGCGCAACGCGAAGCTGATGCGCCTGCTCGACCAGGTCGCGGAGATCGACGAGGGTGTGCGGGCGTTGCGGCGCCGGCGCAGCGAGGCCTTCACCAAGCGCAACGCCCGCGCGATCCGGGAGCTGCAGGTGCGTGGGGTGGCCGACCCGGAGCTGGACTCGTTGCTGTCGGCGACGGCGTTGTCGAGCATGGTCAGCCGGATGGCGCAGCTGACGTTCGTGCACGGGGAGCCGTGGGAGCTCGACGAGCTCGTCGAGACGCTCACCCGGCTGTGGACGAACGCGCTGCGGATCACGCCGCGTCAGCATTGA
PROTEIN sequence
Length: 210
MDVGRDVREPPRTARGLRTRATLVAAARRVFERKGYLDAKLTDITREAQCAVGSFYTYFTNKEEIFAAVLEEAKEEMLHPNVREMTGTDDPVAVIRAANRAYLESYARNAKLMRLLDQVAEIDEGVRALRRRRSEAFTKRNARAIRELQVRGVADPELDSLLSATALSSMVSRMAQLTFVHGEPWELDELVETLTRLWTNALRITPRQH*