ggKbase home page

cn_combo_scaffold_6176_13

Organism: CN-SCN_Pseudonocardia_51x

partial RP 9 / 55 MC: 1 BSCG 8 / 51 MC: 1 ASCG 4 / 38
Location: comp(12306..15596)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, putative ATPase, winged helix family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWX2_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 84.6
  • Coverage: 999.99
  • Bit_score: 1777
  • Evalue 0.0
winged helix family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 84.6
  • Coverage: 999.99
  • Bit_score: 1777
  • Evalue 0.0
  • rbh
Transcriptional regulator, putative ATPase, winged helix family {ECO:0000313|EMBL:AEA24227.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.6
  • Coverage: 999.99
  • Bit_score: 1777
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 3291
GTGACGCCCGTGGTCACGGTGTCGGTCCTCGGTCCGCTGCGCGCGGACGTCGACGGCCGTCCCGCCGACCTGGGTGGGCCCCGCCAGCGTGCGGTGCTCGCGCGGCTCGCCGTCGCCGGCGGACAGCCCGTGTCGGCCGACCTTCTCGTCGACGACATCTGGTCCGGCGAGCCACCACCCCGCGCGCTGGCGGCGCTGCAGGTCCACGTGTCGCACCTGCGGCGCATCCTCGAACCGAACCGGCCGCCGCGCGCGCCCGCGACGGTACTGGTGAGCGTCGCGCCCGGCTACGCGCTGGCGCTGGAGCCCGACGCGCTCGACTCCCGACGGGCCGCGCGCCTGCTCGACGAGGCCGCCGCGCTGCCCCCGGTCGCCGCGATCGCGCCGCTGCGCGCGGCGCTGGAGTGCTGGGCGGGCGCCGCCTACGCGGAGTTCGCCGACGAGCCATGGGCCGCACCGGAGGCGGCGCGGCTGGCGGAGCTGCGGTTGCAGGCCGTCGAGCGGCTGGCGGAGGCCCGGTTGGCGACGGGGGAGGCGGCGGCGGTCGTCCCGGATCTCGACCGGCACGTCCGCGGCCATCCGCTGCGCGAGGAGGCCGTCCGGCTGCTGGCGCTCGCCCTGTACCGGGCGGGGCGGCAGGCCGACGCGCTGGCAGCGCTCGCGGGGGCCAGGGCTCGGCTGGCCGACGAGCTGGGCGTCGATCCCGGCCCCGCGCTGCGGGAGCTGGAACGCGACGTCCTGGCCCAGGCCCCGCACCTCGCAGCGACCCCCTCAGCCCCCGTGAAGGCGGCGGCCGCCGCGCCGGCGCCGCCCGTCGCGGAACCGCCCGTGCTGCTCGGTCGCGAGGCCGAGCTCGACCGCCTCCGGGCCGCCGCCGTGCGGGCCGGGGCGCCGGGACCGCAGGTCGTGCTCGTGTCGGCCGACGCCGGTGTCGGCAAGTCGACGCTGGTGGAGGGCTTCCGCGCCGAGCTCGCCGCGAGCGGATGGGACACCGTCGTCGGACGCTGCCCGGAGGCCGAGGGTGCCCCGCCCGGCTGGCCGTGGCGCGAGATCGTCACCGCCCTGACCGCCGCGCGGCCGCCCGCACCCGAGCTGGCCGAGCGCCTCGCCCCGCTGCTCGACGCCGGGCCCGTCACTCCCGACCGCACGTTCTGGCTGGCGACGGCGGTCGCCGAGCTCTTGGCCTCGCACACCGCCGCGGCGCCCGTGCTCGTCGTGCTGGAGGATCTCCACCGTGCCGACGGCGAGTCGTTGCAGCTGCTGCGCACCGTCGCGGGAGGCCTTGCGGGGCACCGGCTCCTGGTCGTCACGACGCTGCGGCCCGCTGAGGCCGGCGACGAGCTCGCGGCGACGTTCGCCGCGCTGGCCGGGCCCATCGGCGACCGGATCGAGCTCGCCGGGCTCGACCGCGAGTCCATCGTGGAGCTGCTGCGCCGCAACGGTTCCGGCGAACTGACCGCCGAGCAGGTCACCCGCGTCGCCGAACGTACCGACGGCAACCCGCTGTTCGTCCGGGAGACCGCGCGGCTGGCCGCCGCCGAGGGCTGGTCGACCGCCGCGACCGCCGTTCCGGCCGGGGTCGGCGACGTGCTGCGCCGCCGGCTCGCCCGGCTGCCCGCACAGGCCCGCACGGTGCTGCGGCAGGCGGCGGTGCTGGGGCGCGACGTCGACGTCGACACCCTGCTGGCGCTCGTGGGCGACGCGGGCGAGGACGAGGCGCTCGACGCGCTGGAGCTGGGCGTCATGTCGGGGCTGCTCACCGAGCCCGACCCGGCCAGCGTGCGGTTCGCCCACGTCCTGGTCCGCGACACGCTCTACGAGGACATGCCGCGGCTGCGCCGGACCCGGGCCCACGCGGCGGCCCTGGAGGCCGTCTCGGCCGTGCGGCCGGGGGACCGGAGCGCGCTGGCGCACCACGCGCTGGCCGCCGGTGCGGCCGTCGACGCCGGGCGTGCCGTCGTGCTCGCCTCCGACGCCGCCCGCGCCGCCGCCGCCGCGGGTGCGCACCGGCAGGCCGCCGGGCTGTGGGCCGCCGTCGCCGACCGCTTCGACGCCGCCGCACTCGGCCGCGAGGCCCGGCTCGACGTGCTGTGCGCCCACGTCTCCGCGCTCGCCCACTCGGGTGCGACGGCCCCCGCGGTGCGCCGTCGAGCCGAGGCGCTCGACCTGGCGCTGGCCGGCAGCCCGGTCGCCGACTCCACGCTGACACAGGTCGTGACCTGCTACGACGCCCCCGTGTCGTGGACGTTGCGGGCGGACAACGCCGTCGACACCCGGCTCGTCGGGGTCCTCGAGGGCCTGCTCGACCGCACCGACTCCATCCCCGACCGGGTCCGGCTGCTCACGTCGCTGGTGTTCGAGATCGAGGGGGAGCAGGAAGCGCGGGTCCGGGACCTGACCGCGGAGGCGCTCGCGCTGACCGAGGGCGAGGGCACCGATCCGGCGCTGCGCTGCCTCGCGCTCAACGCCCGCTTCTACGCGATCTTCGGGCCGGACCTGTGGCACGAGATGAAGGGCGTCGGCACCGAGCTGGTCGAGCTCGCCGACCGTGCGGGCCTGCCCGGCTACCGCGCCCAGGGCCTGCACCTGTTGTTCATGGACGCCGCGTCGGAGCAGGATCTCGATGCGGCACAACGCCACGTCGACGCCGCAGTCGCCGCCGCGCCGGGCGGCCAGCTCGGGTTCACCCTCGGCTGGTCGGCGATCTTCGCGGCGCTGCGGGCGCTCGTCGTCGGCGAGTTCGACGCCTCCGAGGCCGCGTACGCCGAGATCGGCGCGCGGCTCGAGGCGGGCGGGGTCACCAACGCGGGGCTGATCGCGATCCTCGGCGGGCTCGCCGTCGCGCACGCGCGCGGTCGCGTCGACGAGCGGTTGCTGGCCGTGTTCGCGATGGTCCACGAGCGGGCCCCGGTGGAGGCCGCGGAGTCGTATGCGCTCGCGCTGGCGATGGCCGGTGACCTCGAGCGGTCCCGGCAGGTGTGGCGGCCCGACATTCCGCAGCGCCGCACCTACTACTGGCAGCTCGGGATGGCGATGCGGTCGGAGACGGCCGTCGCGCTCGGCGACCGGGAGGTCGCCGCCGAGTGCTACGAGGCGTTGCGCCCCTGGGCCGGCACTCTGGCCGGGCTCTCCAGTGGCACCGTCACCCTCGGCCCCGTCGACGAGACCCTCGGCCGGCTGGCGCGCTTGCTGGACCTCCCGGCCGACGAGCACTTCCGCGGTGCGGTCGCCCTCGCCGACCGGCTCGGCGCGCGCCACTGGTCGGCGCGCGCGGCGGCCCAACTGGGCTGA
PROTEIN sequence
Length: 1097
VTPVVTVSVLGPLRADVDGRPADLGGPRQRAVLARLAVAGGQPVSADLLVDDIWSGEPPPRALAALQVHVSHLRRILEPNRPPRAPATVLVSVAPGYALALEPDALDSRRAARLLDEAAALPPVAAIAPLRAALECWAGAAYAEFADEPWAAPEAARLAELRLQAVERLAEARLATGEAAAVVPDLDRHVRGHPLREEAVRLLALALYRAGRQADALAALAGARARLADELGVDPGPALRELERDVLAQAPHLAATPSAPVKAAAAAPAPPVAEPPVLLGREAELDRLRAAAVRAGAPGPQVVLVSADAGVGKSTLVEGFRAELAASGWDTVVGRCPEAEGAPPGWPWREIVTALTAARPPAPELAERLAPLLDAGPVTPDRTFWLATAVAELLASHTAAAPVLVVLEDLHRADGESLQLLRTVAGGLAGHRLLVVTTLRPAEAGDELAATFAALAGPIGDRIELAGLDRESIVELLRRNGSGELTAEQVTRVAERTDGNPLFVRETARLAAAEGWSTAATAVPAGVGDVLRRRLARLPAQARTVLRQAAVLGRDVDVDTLLALVGDAGEDEALDALELGVMSGLLTEPDPASVRFAHVLVRDTLYEDMPRLRRTRAHAAALEAVSAVRPGDRSALAHHALAAGAAVDAGRAVVLASDAARAAAAAGAHRQAAGLWAAVADRFDAAALGREARLDVLCAHVSALAHSGATAPAVRRRAEALDLALAGSPVADSTLTQVVTCYDAPVSWTLRADNAVDTRLVGVLEGLLDRTDSIPDRVRLLTSLVFEIEGEQEARVRDLTAEALALTEGEGTDPALRCLALNARFYAIFGPDLWHEMKGVGTELVELADRAGLPGYRAQGLHLLFMDAASEQDLDAAQRHVDAAVAAAPGGQLGFTLGWSAIFAALRALVVGEFDASEAAYAEIGARLEAGGVTNAGLIAILGGLAVAHARGRVDERLLAVFAMVHERAPVEAAESYALALAMAGDLERSRQVWRPDIPQRRTYYWQLGMAMRSETAVALGDREVAAECYEALRPWAGTLAGLSSGTVTLGPVDETLGRLARLLDLPADEHFRGAVALADRLGARHWSARAAAQLG*