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cn_combo_scaffold_6235_9

Organism: CN-SCN_Pseudonocardia_51x

partial RP 9 / 55 MC: 1 BSCG 8 / 51 MC: 1 ASCG 4 / 38
Location: comp(8231..8890)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Sciscionella marina RepID=UPI00037F8C03 similarity UNIREF
DB: UNIREF100
  • Identity: 47.1
  • Coverage: 206.0
  • Bit_score: 158
  • Evalue 6.10e-36
Putative transcriptional regulator {ECO:0000313|EMBL:GAD35370.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.; similarity UNIPROT
DB: UniProtKB
  • Identity: 40.7
  • Coverage: 194.0
  • Bit_score: 136
  • Evalue 6.00e-29
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 39.2
  • Coverage: 199.0
  • Bit_score: 129
  • Evalue 1.10e-27

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Taxonomy

Microbacterium sp. TS-1 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 660
ATGGGCCGCGACGACATGGACCGCGACGAGCGGCAGCCGAGCCTGCGTGAGCGTCGTCGTCGCCAGACCGAGGACGAGATCGGCATCGCCGCCCTGGACCTCTTCGAACGCCAGGGCGTCGCCGCGACGACGGCCGAGGACATCGCGCGCGCGGTCGGCATCTCGCCGCGCACGTTCTTCCGGTTCTGCGCCACCAAGGAGCAGGCCGTCATGCTGGGCGACAGCGAGCTGGAGGCAGACCTGCTCGCGGAGCTCGGCACGCTGCGCGCCGGCGACGACGCCTACGCCGCGCTCGAGGCCTACTGGCACGACGCGTTGATCCGGCTGGGCACCGACCCGACGTCGGGCGACCGGTTCCTGCGGGTCCGCCGCCTGGCGCTCCACGAGCCGACGGTGCTGGCCACCAGCCTGCGCCTCGACGCCGAACGGACGGAGCTCCGGGTGTCGGCGCTGGTCGCGAGCACGGGGACGACCCCGTTGCGGGCGCGCGCGGTCATCGACGCCTTCTCGACGATGGTCCGGCTGACCCTGGAGGAGTGGGTGCGCTCGGTCGAGGCCGGCGACCCGGCCGATCCGCTGGTCGTCTACGAGCAGTGCCGCGTCGCGTTCCGCGAGGCGGTAGCGGGCGGCTCTCGCCACTCACAGGGGGCAAGGGCGTGA
PROTEIN sequence
Length: 220
MGRDDMDRDERQPSLRERRRRQTEDEIGIAALDLFERQGVAATTAEDIARAVGISPRTFFRFCATKEQAVMLGDSELEADLLAELGTLRAGDDAYAALEAYWHDALIRLGTDPTSGDRFLRVRRLALHEPTVLATSLRLDAERTELRVSALVASTGTTPLRARAVIDAFSTMVRLTLEEWVRSVEAGDPADPLVVYEQCRVAFREAVAGGSRHSQGARA*