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cn_combo_scaffold_6505_6

Organism: CN-SCN_Pseudonocardia_51x

partial RP 9 / 55 MC: 1 BSCG 8 / 51 MC: 1 ASCG 4 / 38
Location: comp(5102..5659)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EJB2_METSB similarity UNIREF
DB: UNIREF100
  • Identity: 38.4
  • Coverage: 185.0
  • Bit_score: 133
  • Evalue 1.80e-28
bacterial regulatory s, tetR family protein similarity KEGG
DB: KEGG
  • Identity: 42.7
  • Coverage: 185.0
  • Bit_score: 145
  • Evalue 1.70e-32
Bacterial regulatory s, tetR family protein {ECO:0000313|EMBL:CDG85596.1}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.7
  • Coverage: 185.0
  • Bit_score: 145
  • Evalue 8.30e-32

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Taxonomy

Janthinobacterium agaricidamnosum → Janthinobacterium → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 558
GTGAAGTCCCGGATCGTGGACAACGCGACGCGCGTGTTCCTCGAGAAGGGATTCCAGGGATCGAGCATCCAGGATCTGGTCGACGCCGCGGGCGTGCCGAAGGGCTCGTTCTACAACCACTTCTCCGGTAAGGAGGAGCTGGCGGTCGAGATCACGCGCCGCTGGGTCGTCGACGGCGGGCTCGACGGGCTGTACGTGCGCTCGGGTGCCCCGCTGCCGCGCCTGCGCGAGCACCTGGAGTCTGCTGCGGCGCGGCGGTTCGCGGAGTACGGACCGCACGGCTGCCTGCTGGGGAACTTCAGTACGGGCGTGCCGGCGGAGTGCGGGCGGCTGCGGGCGCAGGTCGCGGCGGGTCTCGAGCAGTGGACGGCGGCGGTCGCGGCCGCGCTCGCCGAGGCCCGGGAGGCGGGGGACCTGCACGTCGACACCGACGCCGCGGTGCTCGCCCGCTATGTCCTCGACGGGTTCGAGGGTGCGATCGCGCGGGGCAAGGTGTCGGGCGACCGTGCCGTCCTGGACCAGTGGTTCGACGTCACGTTCGGCGTCCTGCTGGTGTGA
PROTEIN sequence
Length: 186
VKSRIVDNATRVFLEKGFQGSSIQDLVDAAGVPKGSFYNHFSGKEELAVEITRRWVVDGGLDGLYVRSGAPLPRLREHLESAAARRFAEYGPHGCLLGNFSTGVPAECGRLRAQVAAGLEQWTAAVAAALAEAREAGDLHVDTDAAVLARYVLDGFEGAIARGKVSGDRAVLDQWFDVTFGVLLV*