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cn_combo_scaffold_7985_12

Organism: CN-SCN_Pseudonocardia_51x

partial RP 9 / 55 MC: 1 BSCG 8 / 51 MC: 1 ASCG 4 / 38
Location: comp(11643..12215)

Top 3 Functional Annotations

Value Algorithm Source
peptide deformylase (EC:3.5.1.88) similarity KEGG
DB: KEGG
  • Identity: 88.4
  • Coverage: 190.0
  • Bit_score: 359
  • Evalue 7.60e-97
  • rbh
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS0 similarity UNIPROT
DB: UniProtKB
  • Identity: 88.4
  • Coverage: 190.0
  • Bit_score: 359
  • Evalue 3.80e-96
Peptide deformylase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D0N6_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 88.9
  • Coverage: 190.0
  • Bit_score: 360
  • Evalue 9.20e-97

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 573
GTGACAGTCCGCCCCATCCGCATCATCGGCGACCCGGTCCTTCACACGCCCACGGCCCCGGTCGTGGAGTTCGACGATGCGCTGCGTGAACTCGTCGACGACATGTTCGACACGATGGCCGCCGCCCACGGTGTCGGGCTGGCAGCCAACCAGATCGGCGTCGGCATGCGGGTGTTCGTCTACGACTGCCCGGACGAGCTCACGAAGTCGATGGCGCGCGGCGTCGTCGTCAACCCGGCGATCGAGACGTCGGCGCTGCCCGAGACCATGCCCGACCCGGAGGACGACGAGGAAGGCTGCCTCTCCGTCCCCGGCGAGCAGTTCCCGACCGGCCGGGCCGACTGGGCCAAGGTCACGGGTGTCGACGTCGACGGGCAGCCGGTTGAGGTCGAGGGCCGCGGGTTCCTGGCGCGCTGCTTCCAGCACGAGGTCGACCACCTCGACGGGCACCTCTACGTCGAGCGGCTGATGGGGCGCAACCAGAAGGCGTCGAAGAAGATGCTCAAGGCCAACGGCTGGGGCGTCCCGGGCCTGTCGTGGGACCCGTCGACGCAGCAGGCCGAAGAGATCTGA
PROTEIN sequence
Length: 191
VTVRPIRIIGDPVLHTPTAPVVEFDDALRELVDDMFDTMAAAHGVGLAANQIGVGMRVFVYDCPDELTKSMARGVVVNPAIETSALPETMPDPEDDEEGCLSVPGEQFPTGRADWAKVTGVDVDGQPVEVEGRGFLARCFQHEVDHLDGHLYVERLMGRNQKASKKMLKANGWGVPGLSWDPSTQQAEEI*