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cn_combo_scaffold_8219_2

Organism: CN-SCN_Pseudonocardia_51x

partial RP 9 / 55 MC: 1 BSCG 8 / 51 MC: 1 ASCG 4 / 38
Location: comp(953..1969)

Top 3 Functional Annotations

Value Algorithm Source
Regulatory protein, LacI:Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F035_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 33.8
  • Coverage: 346.0
  • Bit_score: 177
  • Evalue 2.60e-41
Regulatory protein, LacI:Periplasmic binding protein/LacI transcriptional regulator {ECO:0000313|EMBL:CCV10737.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Ph similarity UNIPROT
DB: UniProtKB
  • Identity: 33.8
  • Coverage: 346.0
  • Bit_score: 177
  • Evalue 3.60e-41
helix-turn-helix family protein similarity KEGG
DB: KEGG
  • Identity: 32.3
  • Coverage: 341.0
  • Bit_score: 163
  • Evalue 8.30e-38

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Taxonomy

Mesorhizobium sp. STM 4661 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1017
ATGGCACGTCCTACCAAGAAGTTCATCCTCTCCGCCCGGGATCGCGCCGCCCTGTCCAACGACGTTGGGCTTTCGCCTGTTACATTGGCGCGCTTTCTTGCCGGCAACCTGGACCTTCCGGAAGCGTCCGCGGTACGGGTTGAGGCCAGCATTCTCGACCTCGGCCTGGGGCGAGCGGTGGAACACGCCCGCCCCGTCGCCTTGATGGTGCCGGATCTCGATGCCCCCTACTTCTCGCATATGGCCCAGTGCCTCGAGCGCGAGGCTCTCGATCTGGGATGGGATCTGCTGGTCGCGCTGACCGGCAACAGTGTGACGCGGGAGATCCGGCTGCTCGGCTTGTTTCCTCCCCGTCAGGTCGCGGGCATACTCCTGTTTACCAACAATGGATCCGACGCAGCCTTGTTGAGCGAATTGGCTGCACGCAACGACGTCGTTGCCCTGGCCGAAGCCGTTCCGGACGGCGAAGCGCACCGAGTGGTCAACGACTATCTGGCCGTCGGTCGGTTGGCCGCCCGTTACCTGACCTCACTTGGGCATCAACGGGTCGCCTTCATCGGCGGCCCACCGCACGTTGACAGTACCAAGCAGATCAGTACCGCGTTCTTCCGCGACAAATATCCGACCATGCCGTCGCGCGCGCTGTTCCAGGCTTACCTGGGGACCCACGACGAGCAGCACGGCTATGGTGCGACGCTCAAGATTGCCGCCCGCCCCGATCGCCCCACGGCGATCTTCGCCGGCAGCAGCGTTATCGCACAGGGGGTAATCCGGGCCTGCAGTCGGCTTGGCTGGATCATCCCCGATGATGTCTCCCTGATTGCTTTCGACGGGGCGGGGCCGCTGGACCTGCTTCGGCCGGCGGTGACGTCGATCTCGGTCAGCATGGAGGATATCGCCCGGCGCAGCCTGACGCTGCTGCAACGCCACGCCCACCGACAGGGGCGGGCGATGACGGAGAGGGTCGGCGTCACGCTTGACATTCGAGAGTCAACGGCGCCGCCACCGCAGCGCTAG
PROTEIN sequence
Length: 339
MARPTKKFILSARDRAALSNDVGLSPVTLARFLAGNLDLPEASAVRVEASILDLGLGRAVEHARPVALMVPDLDAPYFSHMAQCLEREALDLGWDLLVALTGNSVTREIRLLGLFPPRQVAGILLFTNNGSDAALLSELAARNDVVALAEAVPDGEAHRVVNDYLAVGRLAARYLTSLGHQRVAFIGGPPHVDSTKQISTAFFRDKYPTMPSRALFQAYLGTHDEQHGYGATLKIAARPDRPTAIFAGSSVIAQGVIRACSRLGWIIPDDVSLIAFDGAGPLDLLRPAVTSISVSMEDIARRSLTLLQRHAHRQGRAMTERVGVTLDIRESTAPPPQR*