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cn_combo_scaffold_8441_6

Organism: CN-SCN_Pseudonocardia_51x

partial RP 9 / 55 MC: 1 BSCG 8 / 51 MC: 1 ASCG 4 / 38
Location: comp(5866..6789)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type transporter, periplasmic subunit family 3 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWK8_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 89.6
  • Coverage: 307.0
  • Bit_score: 535
  • Evalue 2.60e-149
ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 89.3
  • Coverage: 307.0
  • Bit_score: 534
  • Evalue 2.10e-149
ABC-type transporter, periplasmic subunit family 3 {ECO:0000313|EMBL:AEA28700.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocard similarity UNIPROT
DB: UniProtKB
  • Identity: 89.3
  • Coverage: 307.0
  • Bit_score: 534
  • Evalue 1.10e-148

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 924
GTGACCCGCCGTACCAGCATCGTCTCCGCTCTTGCCGCCGTCGCACTCGCCGCCACGCTCGGCGCATGTGGGTCGGGTGGCGACGGGTCGGGAGGAGGTGGCGGGGGCGGCAGCGCACCGACGTCGTCGGCCGAGGCGATCCCGCCCGCGGCGAAGGACGCCGCGCTCGCCGCGATGGTCCCGGCCTCGATCTCGGCCGACGGCAAGCTGGTGTTCGGGGTGGACGCGTCGTACCCGCCCAACGAGTTCGTCGGCCCCGACGGCACGACGATCGTCGGGATGGACGTCGACCTGGGCACGGCGATCGCGCAGAAGTTCGGGCTGACGCCGGAGTTCCAGAACTCCGCCTTCCCGGGCATCATCCCGGGCATCCAGGGCGGCAAGTACGAGATGGCGATGTCGTCGTTCACGATCAACGACGAGCGGCTGCAGCTCGTCGACATGGTCAGCTACTTCAGCGCCGGCACCAGCCTGGCGACGAAGAAGGGCAACCCGAACGGGCTGAACATCGACGACCTGTGCGGCAAGGCGATCGGCGTCCAGGCCGGCACGGTCCAGGTCGACGACATCACCGCCCGCAGCAAGACCTGCACCGACGCCGGCAAGCCCGCCATCCAGTCCACGGAGCTGCAGCAGCAGACCGACGTGACGCTGGCGCTGACGTCGAACCGCATCGTCGGGATGCTGGCCGACTCGCCCGTCATCGCCTACGCGGTGAAGACGACGGGTGACCAGCTGGAGGTCGTCGGGCAGGCCTACGACACCGCGCCGTACGGCGTCGTCGTCAACAAGGGTCAGGGCCAGTACGCGCAGGCCGTGCAGCAGGCGGTGCAGGCGCTGATCGCGGACGGCACCTACAAGAAGATCCTCGACAAGTGGGGTACCGGCGACGGCGCGATCCCGACTGCCGAGGTCCGGAGCTGA
PROTEIN sequence
Length: 308
VTRRTSIVSALAAVALAATLGACGSGGDGSGGGGGGGSAPTSSAEAIPPAAKDAALAAMVPASISADGKLVFGVDASYPPNEFVGPDGTTIVGMDVDLGTAIAQKFGLTPEFQNSAFPGIIPGIQGGKYEMAMSSFTINDERLQLVDMVSYFSAGTSLATKKGNPNGLNIDDLCGKAIGVQAGTVQVDDITARSKTCTDAGKPAIQSTELQQQTDVTLALTSNRIVGMLADSPVIAYAVKTTGDQLEVVGQAYDTAPYGVVVNKGQGQYAQAVQQAVQALIADGTYKKILDKWGTGDGAIPTAEVRS*