ggKbase home page

cn_combo_scaffold_9078_6

Organism: CN-SCN_Pseudonocardia_51x

partial RP 9 / 55 MC: 1 BSCG 8 / 51 MC: 1 ASCG 4 / 38
Location: comp(4562..5200)

Top 3 Functional Annotations

Value Algorithm Source
Regulatory protein TetR n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CNX7_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 82.5
  • Coverage: 212.0
  • Bit_score: 340
  • Evalue 1.10e-90
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 82.5
  • Coverage: 212.0
  • Bit_score: 340
  • Evalue 3.10e-91
Regulatory protein TetR {ECO:0000313|EMBL:AEA22782.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st similarity UNIPROT
DB: UniProtKB
  • Identity: 82.5
  • Coverage: 212.0
  • Bit_score: 340
  • Evalue 1.50e-90

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 639
GTGAGCGCCCCCGCCGACGCCCTCGACGGGCTCACGCCCCGCGGACGGCGCACCCGCGAGGCCCTCGTCGACGCCGCCAAGGACATCTTCGAACGTGACGGCTTCGGCGCTCGCATCACCGACATCGCCGAGCACGCCGGCGTCGCGCACGGCACCTTCTACACCTACTTCGACTCCAAGGAGGAGATCTTCCTGGCCGTCAGCCAGGAACTCCTCGAGGAGTTCTTCCCCGCCGCCCGAACCCGGCCGCCGCAGGCCCGCGATGCCTACGCAGCGATCGAGGCCGCCAACCGGCAGTACCTCGAGGCCTATCTGCGCCACGGCCGGCTCATGGTGCTGTGGGAGGAGATGCCCGGTGTCAGCCCCGGCCTCTCCGACCTGATCGACGACGCGCGCGTCACCGTCGTCGACCGCACCCGGCGCGCGATCCTGCGGCTGCAGGACGACGGCCGCGCCGACGCCGGCGTCGACGCCCGCTACGCCGCCCACGCGCTCGGCGGCATGGTCAACCGCTTCGCCTACAGCTGGGTCGCCAAGGACGAGGCATTCGACCTCGACACCGCCGTCACCCAGCTCAGCCTGTTGTGGGCCAACGCCTTGCGCGTGCCCGTCCCCCGACCGGAACGGAGGCCGAGATGA
PROTEIN sequence
Length: 213
VSAPADALDGLTPRGRRTREALVDAAKDIFERDGFGARITDIAEHAGVAHGTFYTYFDSKEEIFLAVSQELLEEFFPAARTRPPQARDAYAAIEAANRQYLEAYLRHGRLMVLWEEMPGVSPGLSDLIDDARVTVVDRTRRAILRLQDDGRADAGVDARYAAHALGGMVNRFAYSWVAKDEAFDLDTAVTQLSLLWANALRVPVPRPERRPR*