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cn_combo_scaffold_10669_2

Organism: CN-SCN_Pseudonocardia_51x

partial RP 9 / 55 MC: 1 BSCG 8 / 51 MC: 1 ASCG 4 / 38
Location: comp(494..835)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase-binding protein RbpA n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVY0_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 99.1
  • Coverage: 113.0
  • Bit_score: 230
  • Evalue 1.10e-57
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 99.1
  • Coverage: 113.0
  • Bit_score: 230
  • Evalue 3.10e-58
RNA polymerase-binding protein RbpA {ECO:0000256|HAMAP-Rule:MF_01483}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia d similarity UNIPROT
DB: UniProtKB
  • Identity: 99.1
  • Coverage: 113.0
  • Bit_score: 230
  • Evalue 1.60e-57

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 342
ATGGCCGACCGCGTGCTCCGTGGCAGCCGGCTCGGGGCTGTCAGCTACGAGACCGACCGCAACCACGATCTCGCACCGCGGCAGATCGTCCGCTATGTGTCCCCGAACGGCCACGAGTTCGAGGTGCCTTTCGCCAACGACGCGGAGGCCCCCGCCACCTGGGAGTCTCCCCAGGGTGGCCTCGGCAAGCGGGTCGACGGGGCTGAGCCGGAGCAGAAGAAGACGAAGCCGCCGCGCACCCACTGGGACATGCTCCTCGAGCGTCGTTCCCTGGGTGAGCTCGAGGAGCTGCTCTCCGAGCGTCTCGAGCTGCTGCGCGAGCGGCGCGCCGAGATCGCCTGA
PROTEIN sequence
Length: 114
MADRVLRGSRLGAVSYETDRNHDLAPRQIVRYVSPNGHEFEVPFANDAEAPATWESPQGGLGKRVDGAEPEQKKTKPPRTHWDMLLERRSLGELEELLSERLELLRERRAEIA*