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cn_combo_scaffold_11748_3

Organism: CN-SCN_Pseudonocardia_51x

partial RP 9 / 55 MC: 1 BSCG 8 / 51 MC: 1 ASCG 4 / 38
Location: comp(2070..2984)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043744}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043720};; tRNA pseudouridine(55) s similarity UNIPROT
DB: UniProtKB
  • Identity: 86.0
  • Coverage: 301.0
  • Bit_score: 503
  • Evalue 1.50e-139
tRNA pseudouridine synthase B n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D127_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 86.0
  • Coverage: 301.0
  • Bit_score: 503
  • Evalue 1.10e-139
tRNA pseudouridine synthase B similarity KEGG
DB: KEGG
  • Identity: 86.0
  • Coverage: 301.0
  • Bit_score: 503
  • Evalue 3.00e-140

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 915
GTGCCGACTCCCGGACTCGTGATCGTCGACAAGCCCGCGGGGTTCACCTCGCACGACGTGGTGGCCCGGCTGCGCCGCATCCTGCGCACACGCAAGATCGGTCACGCCGGGACGCTCGATCCCATGGCGACGGGCGTGCTCGTCTGCGGGGTGGACCGCGGCACGAAGCTGCTCGGCCACCTCGCGCTCGACACCAAGGCCTACACCGCGACCATCCGCCTCGGCGCCTCGACCACCACCGACGACGCCGAGGGTGAAGCCACCGGGGGCGCCGATGCCTCGGCCGTCGCCGAGGACGCGATCCGGGCCGGGATGGCCGCGCTGACCGGCGCGATCGAGCAGGTCCCGAGCTCCGTCAGCGCCGTGAAGATCGACGGCAAGCGCGCCTACGCCCGCGTCCGGGCGGGGGAGGACGTCGTCATCCCGGCGCGGCCCGTCACGGTCTCGGAGTTCACCCTCGACGCGCTGCGCCGGGGTTCCCCCGAATCGGCGGCCGTCACCGATCTCGACGTCACCGTCTCCTGCTCCTCGGGCACCTACGTCCGGGCGCTGGCCCGTGACCTCGGCGCCGCACTCGGCGTCGGCGGGCACCTGACGGCGTTGCGCCGCACCATGGTCGGCCCGTTCACCCTCGACCACGCACGCACCCTCGAGGTCCTGGAGACCGACCCGGTGCTCTCGCTCGACCTCGACGCCGCTGTCGCCACCGCCTTCCCACGCCGCGACGCCGACGCCGACACGGCCACCGACCTCTCCCACGGCCGACCCCTGCCCGTCGCGGGCATCGACGGCACCTACGGCGTGTTCGCCCCCGACGGGCACGCGGTCGGTCTCGTCGCCGAACGCGACGGTGCCGCACGGCCCGTCGTCGTCCTGACCCCGGCCGGGAGCGGGCCCGCGCCGGACGGCCCGTAG
PROTEIN sequence
Length: 305
VPTPGLVIVDKPAGFTSHDVVARLRRILRTRKIGHAGTLDPMATGVLVCGVDRGTKLLGHLALDTKAYTATIRLGASTTTDDAEGEATGGADASAVAEDAIRAGMAALTGAIEQVPSSVSAVKIDGKRAYARVRAGEDVVIPARPVTVSEFTLDALRRGSPESAAVTDLDVTVSCSSGTYVRALARDLGAALGVGGHLTALRRTMVGPFTLDHARTLEVLETDPVLSLDLDAAVATAFPRRDADADTATDLSHGRPLPVAGIDGTYGVFAPDGHAVGLVAERDGAARPVVVLTPAGSGPAPDGP*